Sphingobium sp. RAC03: BSY17_406
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Entry
BSY17_406 CDS
T04461
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase, large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sphr
Sphingobium sp. RAC03
Pathway
sphr00240
Pyrimidine metabolism
sphr00250
Alanine, aspartate and glutamate metabolism
sphr01100
Metabolic pathways
sphr01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sphr00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
BSY17_406 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
BSY17_406 (carB)
Enzymes [BR:
sphr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
BSY17_406 (carB)
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Gene cluster
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Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp_4
CoA_binding_2
RimK
ATP-grasp_5
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AOF95505
UniProt:
A0A1B3MQV8
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Position
complement(416052..419387)
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AA seq
1111 aa
AA seq
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MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLAKYGVQMIGADA
EAIDKAEDRIKFRDAMDKIGLESARSRIAHTMEEALEGLEFTGLPSIIRPSFTMGGTGGG
IAYNRDEFMTIVRGGLDASPTTEVLIEESLLGWKEYEMEVVRDRNDNCIIICSIENVDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGAEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLCGFNDVDHLAGAPKD
DIVAALAQPTPDRLLVAAQALREGLTVAEIHNIAKFDPWFLERIKEIVEAEAQVLENGLP
RDADGMRHLKSMGFSDKRLAYLALKSANLRGMERGIARGSGLIHEAVKAMTGGVTEAEVR
KLRHKLGVRPVFKRIDTCAAEFAAKTPYMYSTYEAPIFGEAENESAPTDREKVVILGGGP
NRIGQGIEFDYCCVHACFALSEAGYETIMVNCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LAIEMTNGTLKGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALIDKL
KLRQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYITTAVQVS
GESPVLIDQYLRDAIEVDVDALCDGEDVVVAGVLQHIEEAGVHSGDSACSLPPYSLSDEI
IAEIERQTEVLAHALSVRGLMNIQFAVKDGMVYLIEVNPRASRTVPFVAKAIGTPIAKIA
ARVMAGEMIRDLPKIDRNAIDHVAVKEAVFPFGRFPGVDPVLSPEMKSTGEVMGIDSNFA
TAFAKAQIGAGTLLPTSGTVFISLKDSDKPVILPAARKLVDMGFTLIATGGTADYLADHG
IAVEKVNKVAEGRPHIVDKITDGDVQLIFNTTEGWQSLKDSKAIRTSALRGKVASFTTAA
ASVAAADAIEALREHPLEVRSLQSYYPLSHA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaagaaccgacatctcctccatcctcatcatcggcgctggcccgatcatcatc
ggccaggcgtgcgagttcgattattcgggcacgcaggcggtcaaggcgttgaaggaggag
ggctatcgcatcatcctcgtcaattccaatccggccacgatcatgaccgacccggaattt
gccgacgcgacctatgtcgagccgatcacgcccgaaatcgtggcgaagatcatcgagaag
gagcggccggacgcggtgttgccgacgatgggcgggcagacggcgttgaacaccgcgctg
gcgctgttcaacgacggcacgctggcgaaatatggcgtccagatgatcggcgccgatgcg
gaggcgatcgacaaggccgaggaccggatcaagttccgcgatgcgatggacaagatcggg
ctggaatcggcgcggtcgcgcattgcgcatacgatggaagaggcgctggaagggctggaa
tttaccgggcttccctcgatcatccgccccagcttcacgatgggcggcaccggcgggggc
atcgcctacaatcgcgacgagttcatgaccatcgtgcgcggcggactggatgcgtcgccg
acgaccgaagtgctgatcgaggaatcactgctcggttggaaagaatatgagatggaggtc
gtgcgcgaccgcaacgacaattgcatcatcatctgttcgatcgagaatgtggacccgatg
ggcgtccataccggcgacagcatcaccgtcgcgccggcgctgacgctgaccgacaaggaa
tatcagatcatgcgcaacgcatccattgcggtgctgcgtgaaatcggcgtggaaacaggc
ggttccaacgtacagttcgcggtcaatcccaaggatggccgcctggtcgtcatcgagatg
aacccgcgcgtgtcgcgttcgtccgcgctggcatcgaaggcgaccggcttcccgatcgcc
aaggtcgcggcgaagctggcggtgggctatacgctcgacgagatcgagaatgacattacc
ggggcgaccccggcctcgttcgaaccgacgatcgactatgtcgtgaccaagatcccgcgc
ttcgcgttcgagaagttcaagggtgccgaaccgctgctgggcacggcgatgaagtcggtc
ggcgaagtcatggcgatcggccgcaacatccatgaatcgatgcagaaggcgctgcgcggc
ctggaaaccgggctgtgcggcttcaatgatgtcgaccatctggcgggtgcgcccaaggac
gacatcgtcgcggccctggcgcagccgacgcccgaccggctgctggtcgcggcgcaggcg
ttgcgcgaagggctgaccgtcgcggagatccacaatatcgccaagttcgatccctggttc
ctggagcggatcaaggaaatcgtcgaggccgaagcgcaggtgctggaaaatggcctgccg
cgtgatgccgatggcatgcggcacctcaagtcgatgggcttttccgacaagcggctggcc
tatctcgcgctcaaatccgccaatttgcgcggcatggagcggggcattgcgcgcgggtcg
ggcctgatccacgaagcggtcaaggcgatgaccggcggcgtgaccgaagcggaggtgcgc
aagctgcgccataagctgggcgtgcggccggtgttcaagcgcatcgacacctgcgcggcc
gagttcgcggccaagacgccctatatgtattcgacctatgaagcgccgatcttcggggaa
gcggagaatgaatccgcgccgaccgatcgcgaaaaggtcgtaattctgggcggcgggccg
aaccggatcgggcaggggatcgagttcgactattgctgcgtccatgcctgcttcgcgctg
tcggaggcgggctatgaaacgatcatggtcaactgcaacccggaaacggtgtcgaccgac
tatgacacgtcggaccggctctatttcgagccgctgaccgccgaggatgtgctggaaatc
ctggccatcgaaatgaccaacgggacgctcaagggcgtgatcgtgcagtttggcgggcag
accccgctcaagctggcgcaggcgctggaggatgcgggcatcccgatcctgggcacctcg
cccgatgcgatcgacctggccgaggatcgcgagcggttcgccgcgctgatcgacaagctc
aagctgcgccagcctgccaacggcattgcgcgcagccgggaggaggcgatcgcggtcgcc
aaccgcatcggctatccggtgctgatgcggccaagctatgtgctgggcggtcgggcgatg
gagattgtcgacgggcaggcgcagctggaggaatatatcaccaccgccgtccaggtgtcg
ggcgaatcgccggtgctgatcgaccaatatctgcgcgacgcgatcgaggtcgatgtcgat
gcgctgtgcgatggcgaggatgtcgtggtcgcaggcgtgttgcagcatatcgaggaggcc
ggggtccattcgggcgacagcgcttgctcgttgccgccctacagcctgtcggacgagatc
atcgcggagatcgaacggcagaccgaggtattggcccatgcgctgtcggtgcgcggcctc
atgaacatccagttcgcggtgaaggatggcatggtctatctgatcgaggtcaacccgcgc
gccagccgcacggtgcccttcgtcgccaaggcgatcggtacgccgatcgccaagatcgcc
gcgcgggtgatggcgggcgagatgatccgcgatctgcccaagatcgaccgcaatgcgatc
gaccatgtggcggtcaaggaagctgtgttcccgttcgggcgcttccccggtgtcgatccc
gtcctgtcgccggaaatgaagagcaccggcgaagtcatgggaatcgatagcaattttgct
actgccttcgccaaggcgcagatcggcgcggggacgctgctgccgacgagcggcacggtg
ttcatctcgctcaaggatagcgacaagccggtgatcctgcccgccgcgcgcaagctggtc
gatatgggctttacgctcatcgcgacgggcggcacggccgattatctggcggaccatggt
attgcggtggaaaaggtgaacaaggtggccgaggggcgtccgcatatcgtggacaagatc
accgatggcgatgtgcagttgatcttcaacacgaccgagggctggcagtcgttgaaggac
agcaaggcgatccgcaccagtgcgctgcgcggcaaggtcgcgagcttcaccacggccgcc
gccagcgtcgctgcggccgatgcgatcgaggctttacgggagcatccccttgaagtgcgc
tcgctccagtcctattatcccctgtcgcacgcctga
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