Sphingobium sp. TKS: K426_12440
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Entry
K426_12440 CDS
T04965
Symbol
alaS
Name
(GenBank) alanyl-tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
spht
Sphingobium sp. TKS
Pathway
spht00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spht00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
K426_12440 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spht01007
]
K426_12440 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spht03016
]
K426_12440 (alaS)
Enzymes [BR:
spht01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
K426_12440 (alaS)
Amino acid related enzymes [BR:
spht01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
K426_12440 (alaS)
Transfer RNA biogenesis [BR:
spht03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
K426_12440 (alaS)
Prokaryotic type
K426_12440 (alaS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
AMK23423
UniProt:
A0A126RME6
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All DBs
Position
1:2476297..2478951
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AA seq
884 aa
AA seq
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MTSTNDIRRSFLDYFGANGHTIVPSAPLVPHNDPTLMFVNAGMVPFKNVFTGLETRPYNK
ATSSQKSVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYFKEQAITHAWTLLTKEWGI
PAERLTATVYHTDDEAFDLWKKIAGLPEHKIIRIPTKDNFWAMGDSGPCGPCSEIFYDHG
EHIWGGPPGSPEEDGDRFVEIWNLVFMQYEQEANEIVSELPKPSIDTGMGLERVAAVLQG
VHDNYDTDTFKALIEESGALTKTAIDGEHKASHRVIADHLRSTSFLIADGVLPANEGRGY
VLRRIMRRAMRHAHIIGAKEPLMHRLVGSLVSEMGGAYQELVRAQPLIEETLLREETRFR
KTLENGLKLLDEATGDLHEGGTLSGETAFKLYDTFGFPYDLTEDALRSRGLGVDREGFDK
AMAEQKAAARAAWKGSGEKASDEIWFDIAESTGSTEFIGYTATVGEGEVLALVKDGARID
AAGPGDEVMIITNQTPFYGESGGQMGDAGTISSQAGLVADVEDTAKPLGRLHAHKAKVGA
GKIKVGDTVHLSVDVNRRDRIRANHSATHLLHAALRNQLGAHVTQKGSMVAPERLRFDFS
HPEALTHSQISAIEAEVNEQVRHNEAVTTRLMTPDDAIQAGAMALFGEKYGDEVRVLSMG
TGDAHSYSVELCGGTHVRATGDIAIFKIISESAVSSGVRRIEALTGEAARLWLSDREDRL
RQSAAALKTTPEEVPARIAALVEQSRKLERELAEAKKALALGGGGSAQAAGPEKVGAIDF
IGQVIGGLDPKELRGLVDQNKATLGSGVSAVLAVVDGRATIAVGVTDDLKDSISAVDLVR
AGVEALGGKGGGGRPDMAQGGGPEGDKAQAAIEAVKATLANVPA
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgaccaacgacattcgccgctccttcctcgactatttcggggccaacggccac
accatcgtcccatcggcgcctctggtgccgcacaacgacccgacgctgatgttcgtcaat
gcgggcatggtgccgttcaagaatgtcttcacagggctggaaacccgcccgtacaacaag
gcgacgtcgagccagaagtcggtccgtgccggcggcaagcataacgacctcgacaatgtc
ggctacaccgcgcgccaccatactttcttcgaaatgttgggcaatttcagcttcggcgac
tatttcaaggaacaggcgatcacccacgcctggaccctgctgaccaaggaatggggcatc
ccggccgaaaggctgaccgccaccgtctatcacaccgacgatgaagccttcgacctttgg
aagaagattgcaggcctgcccgagcacaagatcatccgcatccccaccaaggataatttc
tgggcgatgggcgatagtggtccttgcggtccctgctcggaaatcttctacgatcatggc
gagcatatctggggcggccctccgggaagcccggaggaggatggcgaccgcttcgtcgag
atctggaacctcgtcttcatgcaatatgagcaggaggcgaatgagatcgtctccgaactg
cccaagccgagcatcgacaccggcatgggcctggaacgcgtcgccgctgtacttcagggc
gtccacgacaattacgacaccgacactttcaaggcgctgatcgaggaatcgggtgcgctg
accaaaaccgctatcgatggcgagcataaggccagtcaccgcgtcatcgcggatcacctg
cgctcgaccagcttcctgatcgcggatggcgtgctgcccgcgaacgaaggccgcggctat
gtgctgcgccgcatcatgcgccgcgccatgcgccacgcccacatcatcggcgcgaaggag
cctttgatgcatcgtctggtcgggagtctcgtctccgaaatgggcggcgcttatcaggaa
ctggtccgcgcccagccgctgatcgaggaaacgctgctgcgtgaggaaacccgcttccgc
aagacgctggaaaacgggctcaagctgctcgacgaagcgaccggcgacttgcacgaaggc
ggcacgctctccggcgaaaccgcgttcaagctctacgacacttttggctttccctatgac
ctgaccgaagacgcgctgcgttcgcgcggcctcggcgtcgatcgcgaaggcttcgacaag
gcgatggcggaacagaaggccgctgcccgcgccgcgtggaagggatcgggcgaaaaggcg
tcggacgaaatctggttcgacattgccgaaagcaccggcagcaccgaattcatcggctac
accgccacagtgggcgagggcgaagtcctcgcgctggtcaaggacggcgcgcgcatcgat
gcggccgggccgggcgatgaggtcatgatcatcaccaaccagacgcccttttacggcgaa
agcggcggccagatgggcgacgcgggcacgatcagctcgcaggcgggcttggtcgcggat
gtggaagatacagccaagccgctcggccgcctccatgctcacaaggcaaaggtcggcgcg
ggcaagatcaaggttggcgacaccgttcacctgagcgtggacgtcaaccgccgcgatcgc
atccgcgccaaccacagcgcgacgcatttgctgcatgccgcactccgcaaccagttgggt
gcgcatgtcacgcagaagggcagcatggtcgcgccggaacgcctgcgcttcgacttctcc
catcccgaggcgctgacccacagccagatttccgcgatcgaggctgaggtgaacgagcag
gtccgccataatgaggcggtgacgacccgcctgatgacgcccgacgacgccatccaggca
ggcgccatggccctgttcggggaaaaatatggcgatgaagtccgcgttctttcgatgggg
acgggtgacgcgcacagctattcggtcgaactctgcggcggcacccatgtccgcgcaacg
ggcgacattgcgatcttcaagatcatctcggaatctgccgtctcatccggcgtccgccgc
atcgaggcgctgactggcgaagcggcgcgcctctggctgtccgaccgcgaggatcggctg
cgccagtccgccgccgcgctcaagacgacgccggaggaagtcccggcccgcatcgccgcg
ctggtcgaacagagccgcaagctcgaacgcgaattggccgaagcgaagaaggcattggct
ttaggcggcggcggctccgcacaggcggcaggccccgaaaaggtcggcgccatcgacttc
atcggtcaggtcataggaggccttgaccccaaagagctgcgcggcctggtcgaccagaac
aaggcgaccttgggcagcggcgtctccgcggtcctcgccgttgtcgacgggcgtgccacc
atcgccgtcggcgtgaccgatgatctgaaggacagcatcagcgccgtcgaccttgtacgc
gcgggcgtggaagcgctgggagggaagggcggcggcggccgtccggatatggcccagggt
ggtggccctgaaggcgacaaggcacaggccgcgattgaagcggtcaaggctaccctcgcc
aacgttccagcctaa
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