Sphingorhabdus sp. YGSMI21: CHN51_04740
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Entry
CHN51_04740 CDS
T05308
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CHN51_04740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphy03400
]
CHN51_04740
Enzymes [BR:
sphy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CHN51_04740
DNA repair and recombination proteins [BR:
sphy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CHN51_04740
RecFOR pathway proteins
CHN51_04740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_22
nSTAND3
AAA_16
AAA_18
AAA_14
Sigma54_activat
AAA_17
Rad17
TsaE
RNA_helicase
NTPase_1
AAA_2
AAA_28
NB-ARC
NACHT
AAA_33
Bac_DnaA
ABC_tran
AAA_24
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ATW02916
UniProt:
A0A2D3RB28
LinkDB
All DBs
Position
complement(993156..994190)
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AA seq
344 aa
AA seq
DB search
MSEVESERMVSSERKVEDIDAALRPKTLDEFIGQEAARGNLRVFIEAAKGRSEALDHVLF
FGPPGLGKTTLAQIIARELGVGFRATSGPVIAKSGDLAALLTNLEEGDVLFIDEIHRLNP
VVEEVLYPAMEDRALDLIIGEGPSARSVRIDLPQFTLIGATTRQGLLTTPLRDRFGIPVR
LNFYTTEELEQVVHRAARLLDLDIAPDGATEVARRARGTPRIAGRLLRRVRDFANVAGTR
LVDRKIADESLVRLEVDSIGLDAMDRRYLYMIADVYKGGPVGVETLAAGLSEPRDTVEEV
IEPYLIQLGLIARTARGRTLNDRGWKHLGLTPPAGKEVDGELFD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagttgagagcgaacggatggtttccagcgaacgcaaggtcgaagacatcgac
gccgccctgcgtccgaaaacgctcgacgaatttatcgggcaggaagcggcgcgcggcaat
ttgcgggtgtttatcgaggcggccaaggggcgtagcgaggcgctggatcatgtgctgttc
tttgggcctcctggcctcggcaagaccacgctggcacagatcattgcacgggaactgggc
gttggctttcgcgccacttccgggcccgtcatcgccaagtccggcgatcttgcagcgctg
ctgaccaatcttgaagaaggcgatgtcctgtttatcgacgagattcaccggctcaatccg
gtggtcgaggaagtcctctatccggcgatggaagatcgcgcgctcgatctgatcatcggc
gaaggcccctcggcgcgctcggtacggatcgacctgccgcaattcaccctgatcggcgcg
accacgcgccagggcctgctgaccacgccgctgcgcgaccgtttcggcataccggtgcgg
ctcaatttctataccaccgaggaactggaacaggtcgttcatcgcgccgcgcggcttctc
gatctcgatattgcgcccgatggtgccaccgaagtggcgcgccgcgcacggggcacgccg
cgtatcgccggtcgcctgctccgccgggtgcgggattttgccaatgtcgcgggcacgaga
ctggtcgaccggaaaatcgctgatgaatcgctcgtccgtctcgaagtcgacagcatcggt
ctcgacgcgatggaccggcgctatctctacatgattgcggacgtctacaagggcggtccg
gtcggtgtggagacgctcgctgcgggcctttcggaaccgcgggacacggtggaggaagtg
atcgagccctatctgatccagctcggcctgatcgcccggaccgcgcgcggccgaacgctg
aatgatcgcgggtggaaacatctcgggctgacgccgcctgcggggaaagaggtggacgga
gagttgtttgattga
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