Sphingorhabdus sp. YGSMI21: CHN51_06125
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Entry
CHN51_06125 CDS
T05308
Name
(GenBank) succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
sphy
Sphingorhabdus sp. YGSMI21
Pathway
sphy00020
Citrate cycle (TCA cycle)
sphy00640
Propanoate metabolism
sphy00660
C5-Branched dibasic acid metabolism
sphy01100
Metabolic pathways
sphy01110
Biosynthesis of secondary metabolites
sphy01120
Microbial metabolism in diverse environments
sphy01200
Carbon metabolism
Module
sphy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sphy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sphy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CHN51_06125
00640 Propanoate metabolism
CHN51_06125
00660 C5-Branched dibasic acid metabolism
CHN51_06125
Enzymes [BR:
sphy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CHN51_06125
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
ATW03165
UniProt:
A0A2D3RBR6
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Position
complement(1259230..1260429)
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AA seq
399 aa
AA seq
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MNIHEYQGKELLAKHGIAVPAGYAALTVDEAVAAAEKLPGPLYVVKAQIHAGGRGKGKFK
ELGPDAKGGVRLAKSVDEVRTNAEEMLGNTLVTIQTGDEGKQVNRLYVTDGVDIEKEFYL
SILVDRASGRVALVVSTEGGMDIEDVAHNTPEKIKTITIDPAQGFMPHHGRTIAFALGLD
GDLNKQAQKLGKKLYDAFLAMDCEMVEINPLVVTEDQQLIVLDTKMSFDGNALMRHPDLA
ALRDETEEDPAEVEASKSDLAYIKLDGNIGCMVNGAGLAMATMDIIKLNGAFPANFLDVG
GGATKEKVTAAFKIILADPAVEGILVNIFGGIMKCDIIAEGIVAAAKEVDLSVPLVVRLE
GTNVEKGKEILANSGLPIVSADDLGDAAKKIVAQVKEAA
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaacattcacgaatatcagggcaaggaactgcttgccaaacatggcatcgctgttcct
gccggctatgctgcgctcaccgttgacgaagcggttgccgcagccgagaaactccccgga
ccgctttatgtcgtcaaggcgcagattcacgcgggtggccgcggcaagggcaagttcaag
gaactggggccggacgccaagggcggcgtgagattggcgaaatcggtcgacgaagtgcgc
accaatgcagaagaaatgctgggtaacacattggtcacgatccagaccggtgacgaaggc
aagcaggtcaaccgcctctatgtcaccgacggcgtcgatatcgagaaggaattttatctt
tcgattctggtcgaccgggccagcggccgcgtggcgcttgttgtttccaccgaaggcgga
atggacatcgaagacgtagcccataacaccccggaaaagatcaagacgatcaccatcgat
ccggcacagggcttcatgccacaccacggtcggaccatcgctttcgcgctggggctggat
ggcgacctcaacaagcaggcgcagaagctcggcaagaaactttatgacgccttcctcgcg
atggattgcgaaatggtcgaaatcaacccgctcgtggtcaccgaagaccagcagctgatc
gtgctcgacaccaagatgagcttcgacggcaacgcgctgatgcggcaccccgatctcgcc
gcgctgcgcgacgaaaccgaagaagatccggcagaagtcgaagccagcaagtccgacctc
gcctatatcaagctcgacggcaatatcggctgcatggtcaatggtgccggcctggcgatg
gcaacgatggatatcatcaagctgaatggcgctttccctgccaacttcctcgacgtgggc
ggcggcgcgaccaaggaaaaggtcaccgcagcgttcaagatcattctcgccgatccggcg
gtcgagggcattctcgtcaatatctttggcggcatcatgaaatgcgacatcatcgccgaa
ggtattgttgccgcggccaaggaagtcgatctgtcggtgcctctggttgtgcgcctcgaa
ggcaccaatgttgaaaagggcaaggaaatcctggccaatagcggtctgccaatcgtatcg
gccgacgatctcggcgatgccgcgaagaaaatcgtcgcgcaggtcaaagaggccgcttga
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