Staphylococcus piscifermentans: SAMEA4384060_2228
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Entry
SAMEA4384060_2228 CDS
T06938
Symbol
pbp4_2
Name
(GenBank) penicillin binding protein 4
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
spic
Staphylococcus piscifermentans
Pathway
spic00550
Peptidoglycan biosynthesis
spic01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAMEA4384060_2228 (pbp4_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spic01002
]
SAMEA4384060_2228 (pbp4_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
SAMEA4384060_2228 (pbp4_2)
Enzymes [BR:
spic01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SAMEA4384060_2228 (pbp4_2)
Peptidases and inhibitors [BR:
spic01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
SAMEA4384060_2228 (pbp4_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
spic01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
SAMEA4384060_2228 (pbp4_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
DUF1958
Beta-lactamase2
Beta-lactamase
Peptidase_S13
SlpA
Motif
Other DBs
NCBI-ProteinID:
SNV08429
LinkDB
All DBs
Position
1:2320797..2322089
Genome browser
AA seq
430 aa
AA seq
DB search
MKKIILITLLIFFASTIITPFSEAATNTPSPAEVANEYGYNISDDFNPEGAVNISQTGQV
LYDYHMNKKWYPASMTKLMTMYLTLEAVKEHKLSLDDKVKITNDDYRMSTLPELSNTKLY
PGETYTIKELLQITVSASSNAAALILAKKVGGNTSDFTDQMNKKAKKLGMTQTHFVNPTG
AENNLLQNYAPKKYKNEMSSRASAKDFAILSQRVIQDTPKILYFTKQLAPTQHGVTYYTF
NWSLEGSELSLKGTDGLKTGSSDIADYNHTITTKRNGFRIDQAIMGAGDYKHLGGEKERN
KMGNSIMNRSFDQYKYVKVLSKGEQKINGKKYFVKKDLYDVLPKDYTKKDYKFVIKDGQV
HIDYPRQFISNQYGPPSVEVKRPLIHEATTFAQSSFSEHPVLTVLGFVFIIAALAIIIFL
IIDGIRRRKK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataatattaataactctgctgatattcttcgcaagtacaattataacacca
ttttcagaagcagccaccaataccccctcccctgctgaagtcgcaaatgaatatggttat
aatatatcagatgacttcaatccagagggcgctgtcaatataagtcagacaggacaagtc
ttatatgactatcatatgaacaaaaaatggtatccagcctccatgacaaaattaatgacg
atgtatcttacgctagaagcagttaaagaacataaattatctcttgatgataaagtgaaa
attactaatgatgattatagaatgtctacattacctgaacttagcaatacgaaactttac
ccgggagaaacttatactatcaaagaacttttacaaattaccgtatcggcatctagtaat
gcggcagctttaattttagctaagaaagtaggaggcaatacttcagattttaccgatcaa
atgaataaaaaagctaaaaaactcggtatgactcaaacacattttgttaatccaacaggg
gctgaaaataaccttttgcaaaattacgctcctaaaaagtataaaaatgaaatgtctagt
agagcatctgctaaagactttgcaattttgtctcaaagagttatccaagacacgcctaaa
atactttatttcactaagcaattagcaccgacccaacatggcgttacatactataccttc
aattggtctctcgaaggctcagaattgagtttgaaaggaacggatggcttaaaaacaggc
tcaagcgatattgcagattataaccatacgattacaactaaacgtaatggcttccgtatt
gatcaagccattatgggcgccggcgattacaaacatcttggtggtgagaaagaacgtaat
aaaatggggaacagtattatgaatcgttctttcgatcaatataaatatgtaaaagtcctt
tctaaaggtgaacaaaaaattaacggtaaaaagtattttgtcaaaaaagatttatatgat
gtgttgccaaaagattacacgaaaaaagattataaatttgtaatcaaagatgggcaagtg
catattgattatccaagacaatttatttctaatcaatatggtccaccttctgtagaagta
aaaagacctttaatacatgaagcaactactttcgcacaatcttcattttctgaacatcct
gtgttgaccgtgctaggattcgtctttattatcgctgcacttgccattattattttctta
attattgatggtataagacgtcgcaaaaaataa
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