Spirosoma sp. KCTC 42546: EXU85_02950
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Entry
EXU85_02950 CDS
T06164
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spik
Spirosoma sp. KCTC 42546
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spik03400
]
EXU85_02950
DNA repair and recombination proteins [BR:
spik03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXU85_02950
Archaeal homologous recombinant proteins
EXU85_02950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
FliJ
ABC_tran
DUF4998
Motif
Other DBs
NCBI-ProteinID:
QDK77606
UniProt:
A0A514ZSN7
LinkDB
All DBs
Position
complement(669930..673040)
Genome browser
AA seq
1036 aa
AA seq
DB search
MIPIKLSIQGLYSYQDLQEIDFQRLTGSSVFGIFGKVGSGKTSLLEAISFALYGETERLN
SRDNRQYNMMNLKSKQLLIDFEFQAGPDQHIYKFVYEAKRHPKKHHEIGPGERRMFIRQE
NDWHPIGNEKEDISVLSKQILGLDYENFKRTIIIPQNQFREFLELSPTERTKMMNQLFKL
DQYDLAGRVGKLSKANDDQLAELRGLLSPLATVTPAAIEHAEANIASSHDAVRAKETEIE
QVEPTERLLLHAQTQSQNLATLQRELSGLQTLEPTYSKLRQTIALYETCRLVFQSDLVML
RKLTDKQTGLVEAKNKTARQLSVTDGQLLGLQSVYEATKKAYEGRNQLQQQIDELDTVQQ
IRLLQESIELQTRNRQQIAIRIGRQILSLDGYKAERQKHQTLIDSLLRQTSQLERLYQAE
KWFAIYKPLKKQADELQKQLTDHETLIEQIKQQKDKVLAGFPEEWAAFTLKTLPAQIDDA
LEQLKAIRKDREKVYQQAFVKQELVHFTDSLTDGTPCPLCGSEHHPAKHTASQGNSDADL
IRQEVLKSENALNKVNQRIDDTTALRLLIEGMTKDLRSALDNSKRLIQERAEIIRQLTEH
EDQFSWHEFDKDRESDLAGAIQQESQQQKQLQEGQKVVRELSKQIDEVETALREEEKQLS
EFDTAIAGLNGQLKTAVESLDYYRLSEVEQWNLRQIADLRDSLTRTYDQTKTNFEEADKQ
KSDAEKLQATLAEQLQQVINQLADLDNDIQAVEGNLAQNLAEQSITRDVVEQVLQSNLDI
DQEKQRIRDYDTKRAGLQKQITDLENELFKSPFDAIALTNVQSHLKTLRDQKDSLNKELG
QLTNVLITLKQQWAKKQEHQKRHDELDLRRQDLKKMDELFRAQGFVNYVSSVYLKNLCES
ANDRFFKLTNNQLKLELDDKNNFQVRDYLNGGETRSVKTLSGGQTFQAALSLALALSDNI
QHLTKAKQNLFFLDEGFGTLDKDSLQTVFKTLKALRSENRVVGIISHVEELQQEVENFIR
AESTENGSRIRRSWDE
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgatacccattaaattatcgattcaaggcctttattcataccaggatttacaggaaata
gactttcagcggctgaccgggtcgagtgtgtttggcatattcggtaaggtgggcagtggc
aaaacgtccctgctggaagcgattagctttgcgctctatggcgaaacggaacggttgaac
agccgcgataatcgacaatataatatgatgaatctgaagtcgaagcagttgctgattgac
ttcgagtttcaggctggccccgatcagcatatctataaatttgtctacgaagcgaaacga
catcctaagaaacaccacgagataggtcccggcgaacgtcgaatgttcattcggcaggaa
aatgactggcatccgatcggaaatgaaaaagaagatatttccgtactgtcgaagcagatt
ctgggcttagactacgagaatttcaagcgtacgattatcattccccagaaccagtttcgc
gagtttctggaacttagtcccacagagcggaccaagatgatgaatcagctgttcaaactg
gatcaatacgatctggccggacgcgtaggcaaattgagtaaagccaacgacgatcaattg
gccgaacttcgaggattattaagtccattggcaacggttacccctgcggctattgaacat
gccgaagccaatattgcgtccagccacgatgcagttcgggcaaaagagacggagattgag
caagtggagccaaccgaacgactactgttacacgcccaaacgcagagtcagaatctggca
acactacagcgggagttgtcaggtctgcaaacattagaaccgacctatagcaaactccga
caaacaattgccctttacgaaacctgtcggttagtctttcagtcggatctggtcatgcta
cgaaagctgacggataagcaaacgggtctggttgaggcaaagaacaaaacagccaggcaa
ctttcagtaacagatggtcaattattgggcctacagtcggtttacgaggccaccaaaaaa
gcctatgaaggccggaatcagttgcagcaacagattgatgagttagatacggtgcagcag
atccgtctcttacaggaatcgattgagcttcaaacacgaaatcggcagcaaatagcgatt
cggatcgggcggcagatactgtcacttgatggatataaagctgaacggcaaaagcaccag
acactgatcgacagtttacttcggcagacatcgcagttagagcggctctatcaggcagaa
aaatggttcgccatttataagccgctcaaaaaacaggccgacgagttacaaaaacagttg
actgatcatgagaccctgatcgaacagatcaaacagcaaaaagacaaggtactggcaggc
tttccggaagagtgggctgcttttaccttaaaaacattgcctgcccagattgacgatgcg
ctggaacagttgaaagccatccgcaaagaccgcgaaaaggtgtaccagcaggctttcgta
aaacaggaattagtccactttactgattccctgaccgatggtacaccctgtccgctttgc
gggtccgagcaccatccagctaaacatacagctagtcagggcaactcggatgctgattta
atcaggcaggaggtgctcaaaagcgaaaatgcactcaacaaagtcaaccaacgtattgat
gatacaactgccctaaggttacttattgaaggcatgaccaaagatcttcggagcgcttta
gacaacagcaaacgactaattcaggaacgagcagagattatacggcaacttaccgaacat
gaggaccagtttagttggcacgagtttgacaaggatcgggagtctgatctggcaggggcc
atccagcaggagagtcagcagcaaaaacaacttcaggaaggtcagaaggtcgttcgggag
ttgagcaaacaaattgatgaggttgaaacggccttacgtgaagaggaaaagcaattaagc
gagttcgatacagcaattgcgggcctaaatggtcaattaaaaacggcggtcgaatcgctg
gactattatcggctttcggaagttgaacaatggaacctgcgccagattgccgacttgcgc
gattcgctcactcgtacatacgaccagacaaaaacaaattttgaagaagccgataagcaa
aaatcggatgcggagaaactacaggctacactggctgaacaacttcaacaggtaatcaac
cagttggcagacctggacaatgatattcaggctgttgagggtaatctggcccaaaatcta
gctgaacagtccataacccgcgacgtagtggagcaggtattgcagagtaatttggacatc
gatcaggaaaagcagcgcatccgcgactatgatacaaaacgggctgggctccagaagcaa
atcactgatttagaaaacgagcttttcaaatctccctttgatgcgattgcacttacgaac
gtgcaaagccatttaaaaaccctccgtgatcagaaagatagcctgaataaagaattgggg
cagctcaccaatgttctgataacgctaaagcagcaatgggcaaaaaaacaggaacatcaa
aaacgccatgatgagttagaccttcgtcggcaggatttgaagaaaatggacgagttgttc
cgggcgcagggttttgtcaattatgtatcgtcagtctacttaaagaacctgtgcgaatcg
gccaatgatcggtttttcaaactaacgaacaaccagttaaagcttgagttagacgataaa
aacaatttccaggtacgcgactacctcaacgggggagaaacccggagcgtgaaaacgctt
tcgggtgggcaaacatttcaggcggctttatcgcttgcactggcactatccgacaatatt
cagcacctgaccaaagctaaacagaacctcttcttcctggacgaaggcttcggtacgctc
gataaggattcactacaaacggtctttaaaacactcaaagccctgcgatccgaaaatcgg
gtagtgggtattatctcacatgtagaagaattgcagcaagaagtggaaaactttattcga
gccgaatccacagaaaatgggagtcgtattcgaaggagttgggatgagtag
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