Spirosoma pollinicola: CWM47_19885
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Entry
CWM47_19885 CDS
T05236
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
spir
Spirosoma pollinicola
Pathway
spir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWM47_19885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_19885
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CWM47_19885
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CWM47_19885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_ZnF
RecR_C
HHH_5
HHH
Ras_bdg_2
PHF5
IMS_HHH
5_3_exonuc
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AUD03885
UniProt:
A0A2K8Z1Z9
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Position
complement(4741230..4741841)
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AA seq
203 aa
AA seq
DB search
MEYPSKLIEDAVNEVSKLPGIGKKTALRLVLHLLKRDEEQTETLAQSLTAMRTRVKYCRK
CHNLSDHDLCTICTSNKRDQSIICVVEDTRDVLAIENTAQFKGLYHVLGGIISPVEGIGP
SDLQIDSLIARLRSPEIEQVREIILAISPTMEGDTTAFYLQKKLRPFNLKISTIARGIPI
GGDLEYADEVTLGRSILSRIAYD
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
ttggaatacccatccaaactcatagaagacgcggtgaatgaggtgtcgaaactgccggga
atcgggaagaaaaccgctctccggctggtgcttcacctgctcaaacgtgatgaagaacaa
accgaaacgctggcccagagtttgacggctatgcggacaagggttaaatattgccgcaaa
tgccacaacctgtccgaccacgatttgtgtaccatttgcacgagtaacaagcgcgatcag
tctattatttgcgtggtggaagatacccgtgatgtactggctatcgaaaataccgctcag
ttcaagggtctttatcatgtgctgggaggtattatctcgcccgtagaaggcatcggacca
agcgacctgcaaattgattcgctcattgcccggctgcgaagtccggaaatagaacaagtg
cgcgaaataatcctggctatcagccctacgatggaaggggacaccacggccttttatctc
cagaaaaaactaaggccgtttaatctgaaaatttcaaccattgcaaggggtatacccatc
gggggcgatcttgaatatgccgatgaggtaacactcggtcgaagcattttgagccgaatc
gcgtacgattaa
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