KEGG   Spirosoma pollinicola: CWM47_22560
Entry
CWM47_22560       CDS       T05236                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
spir  Spirosoma pollinicola
Pathway
spir03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:spir00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CWM47_22560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spir03400]
    CWM47_22560
DNA repair and recombination proteins [BR:spir03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CWM47_22560
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CWM47_22560
SSDB
Motif
Pfam: UvrB_inter UvrB Helicase_C ResIII UVR DEAD AAA_30 AAA_16 AAA_22 UB2H AAA_5 DUF87 AAA_33 Kinesin DUF2785
Other DBs
NCBI-ProteinID: AUD04379
UniProt: A0A2K8Z3G8
LinkDB
Position
complement(5369981..5372002)
AA seq 673 aa
MDFKLTSEFQPTGDQPKAIEQLVKGINEGEPAQVLLGVTGSGKTFTVANLIAQTNRPTLV
LSHNKTLAAQLYGEFKQFFPENAVEYFISYYDYYQPEAFIATTNTYIEKDLAINEEIDKL
RLAATSALMSGRRDVIVIASVSCIYGMGNPEEFKRNVVNIGVGQNMSRNQFLHQLVSILY
SRTEGEFQRGNFRVKGDTVDLYVAYADFAYRVIFFGDEIETIQRIDPETGKKISNETLVT
IFPANLFVTGRDTLNDAMYQIQDDMVSQVRYFESEFREQEATRIRERTEFDLEMMRELGY
CSGIENYSRYFDKRKPGQRPFCLLDYFPDDYLMVIDESHATIPQIRAMWGGDRSRKTALV
DYGFRLPSAMDNRPLTFQEFEDMCGQSIYVSATPSDYELRKSDGVIVEQLIRPTGLLDPE
IEVRPSLNQIDDLLESIDGRIKNGERVLVTTLTKRMAEELTKYLDRVGIKTRYIHSEVKT
LDRVEILRDLRLGNFDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRDIRSLIQTIGRA
ARNVNGKVIMYADRITGSMEKAIDETNRRRAIQLEYNNDNGITPKTVLKSREAIMGQTKV
ADSKAKHFYVEPDEIRIAADPVMRYMGKGDLEKVIQETQSKMERAAKDLDFMEAARLRDE
LFQLRDKLKKETA
NT seq 2022 nt   +upstreamnt  +downstreamnt
atggactttaaactaacctctgaatttcaaccaaccggcgatcagcctaaggctatcgaa
cagttggttaagggtataaatgaaggtgaacccgcacaggtattactcggggtcactggg
tcgggtaagacctttacggtcgccaacctcatcgcccaaaccaatcgcccaacgcttgtg
cttagccataacaaaacgctggcagctcagctttacggcgaattcaaacagttcttcccg
gaaaacgcagttgaatatttcatctcttactacgactattaccagcccgaagccttcatt
gctaccaccaatacgtatattgaaaaagacctcgccatcaatgaggaaatcgacaagctg
cggctggctgccacctcggccctcatgagcggtcggcgcgatgttatcgtaatcgcatcg
gtgtcgtgtatttatggcatgggtaaccccgaagaattcaaacgaaatgtggtcaatatt
ggtgtggggcagaacatgagccgcaaccagtttctgcatcagttagtgagcattctgtat
agccgaacagagggcgaatttcagcggggcaattttcgcgtaaaaggcgatactgtagac
ctgtatgttgcttatgccgattttgcgtaccgggttattttcttcggcgacgaaatcgaa
accattcagcgaatcgaccccgaaacgggcaagaaaatatcgaacgaaacactggtgacg
atcttcccagccaacctgttcgtaacgggtcgtgacacgttgaacgacgccatgtatcag
attcaggacgatatggtgtcacaggtccgctattttgaatcggagtttcgggaacaggaa
gcgacccgcattcgcgaacgcacagaatttgacctcgaaatgatgcgcgaactgggctac
tgctccggtattgagaactactcccgctatttcgacaagcgcaaaccgggtcagcggccg
ttctgtctgctcgattattttccggacgattaccttatggtgattgacgagagtcacgct
accattccgcaaatccgggccatgtggggcggtgaccgctcccgcaaaaccgccctcgtc
gactatggtttccgacttccatcggctatggacaaccgcccgcttacgtttcaggagttt
gaagatatgtgcggccagtcaatctatgtatcagctacaccatcagactacgaacttcgg
aaaagcgatggcgttattgtggagcaacttatccggccaacgggcttgcttgatcctgaa
atcgaagtgcgcccgagtttgaaccagatagatgatttactcgaatccatcgacggacgc
atcaaaaacggcgaacgtgtgctggttacaacgcttaccaaacgcatggccgaggaattg
accaagtaccttgaccgggtgggtattaaaacccgctacattcactccgaagtaaaaacc
cttgatcgggtcgaaatcctgcgcgatttacggttgggcaatttcgatgtactggtaggc
gtcaacctgcttcgtgaaggacttgatttgcctgaagtctcgctggtcgccattatggat
gccgataaagaagggttcctgcgtgacatccggtcattaattcaaacaattggccgtgcc
gcccggaacgtgaacggcaaggtgattatgtatgccgaccgaattaccggctcgatggaa
aaagccattgacgaaacaaaccggcgtcgggccattcagttggagtataacaacgacaac
ggcattacaccgaaaacagtattgaaatcgcgcgaagccattatgggtcaaactaaagtg
gccgattcgaaggcaaagcatttctatgtggagccagacgaaatccggattgccgccgat
cccgttatgcgttacatgggtaaaggggatttagaaaaagttattcaggaaacgcaatcg
aaaatggagcgtgcggccaaagaccttgactttatggaagccgcccgccttcgtgacgag
ttgtttcaactacgtgataagctgaagaaggaaacggcgtag

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