Spirosoma pollinicola: CWM47_29020
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Entry
CWM47_29020 CDS
T05236
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spir
Spirosoma pollinicola
Pathway
spir03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CWM47_29020 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spir03400
]
CWM47_29020 (priA)
Enzymes [BR:
spir01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CWM47_29020 (priA)
DNA repair and recombination proteins [BR:
spir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CWM47_29020 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Helicase_C
PriA_CRR
nSTAND3
AAA_30
zinc-ribbons_6
DUF3638
IstB_IS21
AAA_22
AAA_11
TF_Zn_Ribbon
ATPase_2
TsaE
zf-ribbon_3
HypA
Motif
Other DBs
NCBI-ProteinID:
AUD07537
UniProt:
A0A2K8ZCC9
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All DBs
Position
6897312..6899843
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AA seq
843 aa
AA seq
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MENQANTLFSSFDSEEITFFADLILPIPVPKLFTYRVPRGMADDIKIGARVIVPFGKKNG
RVLTAIVAKLHNTPPATYQARYINELLDEIPLTTSYQLELFGWISEYYMCCIGEVMNVAL
PSGLKISSQSKVQFNPDFDYPELLTEFEEVLLTELKKHSALSYEELERLMGEGSNAAAII
KSLIGKKAIIVFEEVREKYVPKMVRKVRLNRNYEEREQLLVLLQRLEKLPKQQEVVMRYL
SHVPLQRTPSLNQKGLDKTILNQDDELSQSSLSTLIKNQVFETFEIIQPRFSDNDAGLPQ
VEIKLTDAQRSASSQIMAQFESQNIVLLHGITGSGKTEVYIDLIQQALNSGSQVLYLLPE
IALTTQIVVRLQRVFGDTMGIYHSKFSDNERVEVWKGVVSGQYQFVVGVRSAVFLPFDNL
GLIIVDEEHETSYKQHDPAPRYHARDVAIMLAHWQQAKVLLGSATPALETYYQAKQGRYG
LVELFQRFGEATLPNITLVNVQQEKKQKTMKNEFSSALLGALEANMERKEQSILFQNRRG
YSPYMQCEDCDWTAECPNCAVSLTYHQRDAELRCHYCGHKESVPRLCPTCGSTKVKTIGF
GTEKLEDQLQIFFPQSRVLRMDLDTTRAKNAYQQIIQEFEGGQVDILVGTQMITKGLDFD
NVSLVGIFDADRLIHFPDFRATERAFQMITQVSGRAGRRAGRQGTVLIQTSNPQQPVLQK
VIDNNYKGLYEEELKERQDFNYPPFSRLIKLTIRHTDRAISHQAAQRLAAELTDALGSSR
VLGPEEPLVERIRNQFLFDILIKIEREKVNIKAVKTFIQDRINDILTDKGLRQVSIVADV
DCL
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaccaagccaatacattgttttcgtcatttgactctgaagaaataactttcttc
gccgatttaattttgcctataccggtacctaaattatttacttaccgcgttccacgcggg
atggccgatgacatcaaaattggtgccagagttattgttccattcggaaaaaaaaacggc
agggtattgacagccatcgttgcaaagcttcataatacaccgccagctacctatcaggct
cgttacataaatgaactgctggatgaaatcccattaacaacaagctaccaactagaacta
tttggatggatatccgaatactatatgtgctgcataggggaagtgatgaatgtagcgctc
ccttcgggcctgaaaatttcgagtcaatcgaaagtgcagttcaatcctgactttgattac
cctgaactacttactgaatttgaagaagtactgctcactgaactcaagaagcattcggcc
ttatcgtacgaagaacttgagcggctcatgggcgaaggcagcaatgcagccgctattatc
aaatcgctgataggcaaaaaggccatcattgtatttgaagaagtcagggagaaatacgtc
ccgaaaatggtacgtaaggttaggcttaatcgtaattatgaagagcgggaacaacttctg
gtgctgcttcaacggctcgaaaaactacccaaacagcaagaggttgttatgcgctacctg
agccatgtccccctgcagcgcaccccctcactcaatcaaaaaggtttagacaaaaccatt
ctcaatcaggatgatgaactttcgcaatcctcgctgtcaacgctaattaaaaaccaggtt
ttcgaaacgtttgaaatcattcaaccccgcttttcggataacgacgccgggctacctcag
gtagaaattaaactgaccgatgcacagcgatccgcatcatcacagatcatggctcagttc
gagagccagaacattgtgctgctgcacggcattacgggaagcggtaagacggaggtgtat
atcgaccttattcaacaagccctgaacagcggctcacaggtattatacctactgcccgaa
attgccctgacaacccagattgtggtgcgtctgcaacgggtatttggcgatacgatgggc
atttaccattccaagttttcagacaatgagcgtgtcgaggtctggaaaggtgttgtgtcg
ggacagtaccagtttgtggtcggtgtgcggtcggcggtatttttaccgttcgacaattta
gggctgattattgtggacgaggagcacgaaacgagctataagcaacacgatcctgctccc
cgttatcatgcccgcgatgtagccatcatgctggcgcactggcagcaggccaaagtatta
ctaggatcggcgacgcccgctctcgaaacctattatcaggcaaaacaggggcgctatggt
ctggtggagttattccagcgatttggcgaagcaacgttgcccaacattacactggtgaat
gtgcagcaggagaaaaagcagaagacgatgaaaaatgaattttcatcggccctgctcggt
gcgctggaagccaatatggagcgaaaagaacaaagtattctgtttcaaaaccgtcggggc
tattcaccctatatgcagtgcgaagactgcgattggaccgccgagtgccctaactgcgcc
gttagcctgacctatcaccaacgcgacgctgagttgcgatgccactactgcggtcataaa
gaaagcgtgccgcgcctgtgccccacctgcggctccacaaaggtgaagacgattgggttc
gggacggaaaaattggaagatcagctacagattttctttccgcaatcgcgggttttgcgc
atggacttagacacaacgcgtgccaaaaatgcctatcagcaaattattcaggaatttgaa
ggtggtcaggtcgatattctggttggtactcagatgatcacgaaaggactcgatttcgac
aatgttagtttggtaggtattttcgatgcggatcgactcattcacttccccgatttccgc
gccactgaacgcgccttccagatgattactcaggtgagcggccgggccgggcgacgcgcc
gggcggcagggaacggtgctgattcagaccagcaacccacaacagccggtactgcaaaaa
gtaattgacaacaattataaaggactctatgaggaagaactgaaagagcggcaggatttc
aattacccgcccttctcgcgactcattaaactaaccattcgccataccgaccgggccatc
agccatcaggctgcccagcggctagccgccgaattgaccgacgctttgggtagcagccgt
gttttaggtcccgaagaacctctcgttgaacggattcgaaatcagtttctgttcgatatc
cttattaagatagagcgggagaaagtgaacataaaagcggtgaaaacctttattcaggac
cgtattaacgacattcttaccgataagggcctacggcaggtgagcatcgtggccgatgtg
gattgtttgtaa
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