Shewanella pealeana: Spea_0443
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Entry
Spea_0443 CDS
T00606
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
spl
Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:
spl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spl03012
]
Spea_0443
Translation factors [BR:
spl03012
]
Eukaryotic type
Elongation factors
Spea_0443
Prokaryotic type
Spea_0443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_3
MMR_HSR1
SelB-wing_2
GTP_EFTU_D2
SRPRB
SelB-wing_1_3
FeoB_N
PduV-EutP
HTH_24
HTH_IclR
E3_UFM1_ligase
MMR_HSR1_Xtn
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ABV85771
UniProt:
A8GZN4
LinkDB
All DBs
Position
550745..552652
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AA seq
635 aa
AA seq
DB search
MIVVTSGHVDHGKTSLIQALTGTDADRLPEEKQRGMTIELGYAFMDLSDGERLAFVDVPG
HSKFINTMLAGVSCAKHALLIIACDDGVMPQTYEHLAILQLLNLEHLIVVLTKQDKVDAT
RVDEVKEQVSELLAQHQRQSPIFVVSAQSGFGIDALKLAITELAESQITALSETGEQASF
RMAIDRAFSVKGAGLVVTGTVISGQVSQGQSLYLSGQRKPVKVRTLHSQGRVSNSAHHCQ
RVALNITGVDQHRGAERGDWLTALAPAAEAPNVICGVFESCLPFKHWQNVQVHLGNRHTT
ARLGLLQNLEDGTALVELQCEQPLHSVEQDRIIVRDSAAKSTLGALRVLDINPPTRAKRS
VERLAYLENLKQCDSLTASLQVQINHHCVPKSAFMWANQLTEQTACLADKQVISLDGYLL
SSILQEQIEAQLLALIADYHQQSPELLGLSINRLQRMTHNQYPLPVLLKLTDGLREQKLL
QSTRGLLHLPRHNLALSDAELQLWSQIKQQMLSANGPLWSSDLASTLNLELTTVRALCRK
LIQLGYLSAIIKDRFMLTESLYFYADVIRNQINVSGEIKTADFNSIIKLGRKASIQLLEF
YDRSGLTWRKKKDNSRVIRDGSIFIASDLAEEHRS
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgattgttgttacttcaggccatgtggaccacggtaaaaccagcctgattcaagcgcta
actggcaccgatgccgaccgcttaccggaagaaaaacagcgtggcatgaccatagagctt
ggctacgcctttatggatttatcagatggtgagcgcctagcttttgtcgatgtgccgggc
cacagcaaatttattaataccatgctggctggggtgagctgcgccaaacatgcgctattg
atcatcgcttgtgatgatggcgtgatgccgcaaacttatgagcatttagccatcttgcag
ctgcttaatcttgaacacttaatcgtggtgctaaccaagcaagacaaggtcgatgccacc
agagtcgatgaagttaaagagcaagtgagtgagctattggcgcagcaccaaagacaaagc
ccaatctttgtggtgtcggcgcaatctggttttggtatcgacgcgcttaagcttgctatc
actgagcttgccgagtcacagataacagcgttaagcgagaccggcgagcaagccagcttt
cgtatggcaatcgacagagcttttagcgtaaaaggtgcaggtcttgtggtaactggtact
gtgattagtggtcaagtcagccaagggcaaagcttgtatctatcaggccagcgtaaacca
gtaaaagtcagaacccttcacagtcaaggacgggtaagtaatagcgcgcatcattgtcag
cgggtggcgctcaatattactggagtcgaccaacatcgcggcgcagagcgcggagattgg
ttaactgcgctagcgccagcggccgaagcgccgaacgtgatttgtggcgtatttgaatct
tgcctgccgtttaagcattggcaaaatgtgcaagtgcatttaggtaatcgccataccacg
gcgcgcttaggcttactgcaaaaccttgaagatggcacggccttggttgagctgcaatgc
gagcagccccttcatagtgtggagcaagacagaatcatcgtgcgtgacagcgccgctaaa
agcacattaggtgcgctgcgggtattagacattaacccgccaactcgagcaaagcgcagt
gttgagcgcttagcttacctagaaaaccttaaacagtgcgactcactaacggccagtttg
caagttcaaataaaccatcactgcgttccaaagtccgctttcatgtgggctaatcagcta
acagagcaaaccgcttgtttggcggacaaacaggtgatcagcctcgatggttatttgtta
tccagcatattacaagagcagattgaagcgcagttgctggcactcatcgccgattatcat
cagcagtcgccagagctgttagggttgagtattaatcgattgcagcgtatgactcacaac
caatatccattgcctgtgctacttaaacttaccgatggtctcagagagcaaaaactactg
caaagtacccgtggcttattgcatctgccacggcataacttggcgctgtcagacgctgag
ctacagctgtggtcacagataaagcagcagatgcttagtgctaacgggccattatggtca
tcagacttagcatcaacgctaaaccttgagttgactacagtgcgggcgctatgccgtaag
cttatccagctggggtatctgtcggcgattattaaagacagatttatgctcaccgaaagc
ctgtatttctacgccgatgtcattcgtaatcaaatcaatgtgagtggtgaaatcaagacc
gccgattttaattcaatcattaagcttggccgcaaagccagtattcagttgttagaattt
tatgaccgcagtggattaacgtggcgcaagaagaaagacaattcgagagtgattagagat
ggcagcatttttatagcaagtgatttggcggaagaacataggagttga
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