Streptomyces platensis: CP981_27755
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Entry
CP981_27755 CDS
T07341
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
spla
Streptomyces platensis
Pathway
spla03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
spla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CP981_27755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spla03400
]
CP981_27755
Enzymes [BR:
spla01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CP981_27755
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CP981_27755
DNA repair and recombination proteins [BR:
spla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CP981_27755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
DZR
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
QEV54924
LinkDB
All DBs
Position
6240474..6241400
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AA seq
308 aa
AA seq
DB search
MPELPEVEVVRRGLERWVSGRTIDAVEVRHPRAIRRHTAGAADFAARLKGLRLGTARRRG
KYLWIPVTGGGPAAQTAAEGIPPMVTPSVTHGLAILAHLGMSGQLLVQPQDAADEKHLRI
RVRFADDLATELRFVDQRTFGGLSLHDTVPGDADLLPDVIAHIARDPLDPAFDDAAFHDA
LRRRRTTVKRALLDQTLISGVGNIYADEALWRSKLHYERPTATFTRPRTAELLGHVRDVM
NAALAVGGTSFDSLYVNVNGESGYFERSLDAYGREDEPCRRCGTPIRRRPWMNRSSYFCP
RCQRPPRA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagctgcccgaggtcgaggtcgtacgccgcggactggagcgctgggtcagcggc
cgcacgatcgacgccgtcgaggtgcggcatccgcgtgcgatccgccggcacaccgccggg
gcggccgatttcgcggcccggctcaaggggctgcgcctcgggacggcccggcggcgcggc
aaatacctctggattccggtgaccggcggcggtccggccgcccagaccgcggcggagggc
atccctccgatggtcacgccgtccgtcacccacgggctggcgatcctggcccacctcggc
atgagcggccagctgctggtccagccgcaggacgccgccgacgagaagcacctgcggatc
cgcgtccgcttcgccgacgacctggccaccgaactccgcttcgtcgaccagcgcactttc
ggtggcctctcgctgcacgacaccgtccccggtgacgccgatctgctgcccgacgtcatc
gcccatatcgcccgggacccgctcgatcccgccttcgacgacgccgccttccacgacgcg
ctgcgccgccgccggaccaccgtcaagcgcgcgctgctcgaccagacgctgatcagcggc
gtcggcaacatctatgcggacgaggcgctctggcgcagcaagctccactacgagcggccg
accgccaccttcacccggccgcgcaccgccgagctgctcggccacgtacgggacgtgatg
aacgccgcgctcgccgtcggcggcaccagcttcgacagcctctatgtcaacgtcaacggt
gagtccggctacttcgagcgctcgctggacgcctacggccgcgaggacgagccctgccgc
cgctgcggtaccccgatccgccgccgcccctggatgaaccgctccagctacttctgcccc
cgctgccagcggccgccgcgcgcctga
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