KEGG   Streptomyces pluripotens: LK06_022710Help
Entry
LK06_022710       CDS       T04845                                 

Definition
(GenBank) ATP-dependent DNA ligase
  KO
K01971  
bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
splu  Streptomyces pluripotens
Pathway
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:splu00001]
 Genetic Information Processing
  Replication and repair
   03450 Non-homologous end-joining
    LK06_022710
Enzymes [BR:splu01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LK06_022710
DNA repair and recombination proteins [BR:splu03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     LK06_022710
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
complement(5047139..5048131)
Genome map
AA seq 330 aa AA seqDB search
MTPITEVEGRRIALSNLEKVLYPETGFTKAELLHYYATTATALLPHLRDRAVSFLRYPDG
PEGQRFFTKNVPPGTPEWVMTAEVPRSSLEGPARMVVIQDLPSLVWAANLVPEFHTHQWL
VQRPDEADRLVLDLDPGTPANIVHCCEVALWLRERLAADGIEAYPKSAGSKGLHLLAATH
GSSPERASEYAKLLALEAERAMPGLVVHRMTKSLRPGKVFVDWSQNAARKTTAAPYTLRA
RGTPLVSAPVTWEEVVDCRRPEQLEFRADDIASRLRDYGDLMAGLLDAERSAELPRPSGA
GRAAPKKAEGTEGDRKGGKGRAGPRGADET
NT seq 993 nt NT seq  +upstreamnt  +downstreamnt
atgacgcccatcacagaggtggaggggcggcggatcgcgctcagcaacctggagaaggtg
ctgtatccggagacgggcttcaccaaggcagagctgctgcactactacgcgaccaccgcc
accgccctgctgccgcacctgcgcgaccgcgcggtctccttcctgcgctatccggacggt
ccggagggacagcggttcttcaccaagaacgttccaccgggtacgcccgagtgggtcatg
acggccgaggtgccgcggtcctcgctcgaaggacccgcccggatggtggtgatccaggac
ctaccgagtctggtctgggcggcgaacctggtgcccgagttccacacgcaccagtggttg
gtccagcgcccggacgaggccgaccggctcgtcctcgacctcgatccgggcactcccgcg
aacatcgtccactgctgcgaggtcgccctgtggctgcgggagcggctggcggcggacggg
atcgaggcgtacccgaagtcagcggggtcgaagggactgcacctgctggcggcaacacac
ggcagttcccccgaacgcgcgtccgagtacgcgaagctactggcgctggaggccgagcgg
gcgatgcccgggctggtggtgcaccggatgacgaagagcctcaggccggggaaggtgttc
gtcgactggagccagaacgcggcccgcaagaccacggccgccccctacaccctgcgcgcc
cgtgggaccccactggtgtccgcgccggtgacgtgggaggaggtcgtggactgccgccgc
ccggaacagctggagttccgcgcggacgacatcgcctcacgtctgcgcgactacggcgac
ctgatggcgggcctcctggacgcggagcgatcggccgagctgccccgtccctccggagcg
ggccgagcagcaccgaagaaggccgaagggacggaaggagaccgaaagggcgggaagggc
cgagcggggccgaggggggccgacgaaacctga

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