Acidilutibacter cellobiosedens: EQM13_04730
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Entry
EQM13_04730 CDS
T05805
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
spoa
Acidilutibacter cellobiosedens
Pathway
spoa03030
DNA replication
spoa03430
Mismatch repair
spoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EQM13_04730
03430 Mismatch repair
EQM13_04730
03440 Homologous recombination
EQM13_04730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spoa03032
]
EQM13_04730
03400 DNA repair and recombination proteins [BR:
spoa03400
]
EQM13_04730
Enzymes [BR:
spoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EQM13_04730
DNA replication proteins [BR:
spoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EQM13_04730
DNA repair and recombination proteins [BR:
spoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EQM13_04730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Head_binding
Motif
Other DBs
NCBI-ProteinID:
QAT60935
UniProt:
A0A410QAC5
LinkDB
All DBs
Position
990227..993703
Genome browser
AA seq
1158 aa
AA seq
DB search
MSETGKFVHLHVHTEYSLLDGANRIKDLINRTKELNMDTIAITDHGAMFGVINFYKEAVE
NGIKPILGCEIYISRGRYTQKDPKGREQYHLILLAENNEGLKNLMKIVSEGYVNGFYYKP
RVDKDVLRKYSKGIIALSACLAGEIPQNLLEGDFQRAREIALEYRDIFGEDNFFLELQDH
GMREEKLVDEEIINLSRETGIPLVATNDAHYLKREDAKIHDVLLCIQTGKKVDDEDRMKF
PTDEFYIKSYDEMKEIFGNVEEALDNTVKIGKRCNVTLDFGHLHLPRYDVPKGYTNVEYL
RKLAEEGLKKRYGQIDENIKKRFEFEFNTIVNMGYTDYFLIVWDFIKYAKDNGIMVGPGR
GSAAGSIVSYALGIVDIDPTKYGLLFERFLNPERVTMPDIDVDFCYERREEVIDYVINKY
GKDRVAQIVTFGTMQAKGAIRDVGRAINMPYGEVDYIAKQIPMELGMTIDKALEVNKALK
DEYENKPEIKELIDLARAVEGLPRHTSTHAAGVVISKDPITEYVPLSRNGDSITTQYTMT
ELEEMGLLKMDFLGLRTLTVIRDAVNLIEENHKIKIDFSNFSYDDENIYNMFSKGDTLGV
FQFESAGMRRFLKELKPTMFENIVAANALFRPGPMNQIPMYIENKNNPSKIEYPHIKLEP
ILKVTYGCIVYQEQVMQIVRDIGGYSMGRADLVRRAMSKKKMAVMEEERKNFIYGKTDSD
GNIEIPGAIRNGVDEKSAGKIYDLMIDFAKYAFNKSHSAAYSMIAYRTAWLKYYYPVEFM
AALISSVMGDTNQVSLYIQECKRLNIKVLPPDINESDRKFTVSNNEIRFGLSAVKNVGDV
LIDVIVKGRKDGGRYRSFTDFCQRVEKINSSVMNKRAIESLIRCGAMKSLGGNRAQLIKV
FERIMDRAHKDKRNNIDGQTSFFDVNNSDILKDDLPDVKEYSQDELLTMEKEMLGIYVSG
HPLAPYEEDLKKVSNMSTIDILGTKEEGEMSAGGISDGQAVTLGGIIISKKNKITKNNNM
MAFITLEDLYGVIEIIVFPAVYDKFNKYIIEDSVVVVKGRISLSEDEDPKIICESVKPLQ
RFNKDKLYIKIPNINNKDIFNEIKSILMKYKGETPVYIYMEKKNRTIMADRDLWVDSHDS
DLIEKLEDVLGKDCIKIC
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaacggggaaatttgtccacctccatgttcatacggaatacagtcttcttgat
ggggcaaacaggataaaagatttgataaacagaacaaaggaattaaatatggatactata
gctattaccgatcatggggctatgttcggagtaataaatttctataaggaagctgtggaa
aatggtatcaagcctatattgggctgtgagatatatatatcaaggggaaggtatactcag
aaagatcctaaaggaagggagcagtaccatctgattcttcttgcggaaaataatgaaggg
cttaaaaatttgatgaaaattgtttcggaaggatatgtaaatggtttctattataagccg
agagtggataaagacgtacttagaaaatattccaaaggaataattgcattaagtgcatgt
ttggcaggagaaatccctcaaaaccttcttgaaggtgattttcaaagagcaagggaaatt
gctctggaatatagagatatattcggagaggataattttttcttagagttgcaagatcat
ggtatgagagaagaaaagctggtagatgaagaaataataaatttaagcagggaaacgggg
atacctcttgttgcaacaaatgatgcccactatttaaaaagagaagatgctaagattcat
gatgtacttctctgtatacaaacagggaagaaagtcgatgacgaagaccgaatgaaattt
cctacagacgagttctatataaaatcctatgatgagatgaaagaaatatttggaaatgta
gaagaggcattagacaatacagttaaaattgggaaacgatgtaatgtaacattagatttt
gggcatttacatttacccagatatgatgtacccaaaggatatactaatgtagagtatttg
agaaaacttgctgaggaagggcttaagaagagatatggacaaatagatgaaaatataaaa
aagagatttgaatttgaatttaacaccatagttaatatgggatatacggactattttctt
atagtatgggattttataaaatatgctaaggataatggaataatggtagggccggggaga
ggctcggccgccggaagtatagtttcctacgcattaggaatagtagatattgatcccact
aaatacggacttctttttgagagatttttaaatcccgaaagagttactatgcccgatatt
gatgtggatttttgctatgagagaagagaagaagttatagattatgtaataaataaatat
gggaaggacagagtagctcaaatagttacctttggaactatgcaggcgaagggagccata
agggatgtaggaagggctatcaatatgccctatggagaagttgattatattgcaaaacaa
attcctatggagttgggaatgactatagataaagctcttgaagttaataaggcattgaag
gatgaatatgaaaataagccggaaataaaggaactcatagatttagcgagagcggtggaa
ggactgccgaggcatacttctactcatgctgcgggggttgttatatccaaagatcctata
accgaatatgttcctctgtctagaaatggtgattccattactactcaatatacgatgacg
gaattggaagaaatgggattattaaaaatggattttcttgggcttagaactcttacggta
ataagggatgcggtaaatttaattgaagagaatcacaagattaaaatagatttttctaat
ttttcttatgatgatgaaaatatatacaatatgttttccaaaggagatactttgggagtg
tttcagtttgaaagtgcaggaatgagaagattccttaaggaattgaagcccacgatgttt
gaaaatatagtggctgccaatgccctattcagacctggtcctatgaatcaaataccaatg
tatattgaaaataagaataatccttctaaaatagagtatccccatataaaattggaacca
atattgaaagttacctatggctgtattgtatatcaggagcaggtaatgcagatagtcagg
gatataggaggatattccatgggaagggccgatttggtccgcagggctatgagtaaaaag
aaaatggccgtaatggaagaagaaagaaaaaattttatatatgggaagacagattctgac
ggtaatatagaaatacccggggctataagaaatggtgtagatgaaaaaagtgccgggaaa
atatatgatttgatgattgattttgcaaaatatgcttttaataaatctcattctgccgct
tattctatgattgcctacagaacggcttggcttaaatattattatccggtggaatttatg
gcagcacttatttccagcgttatgggagatacgaaccaagtttccctttatattcaagag
tgtaaaagacttaatataaaggtacttcctcccgatataaatgaaagtgatagaaaattt
actgtttctaataatgaaatacgatttggattgtcagcagttaaaaatgtgggggacgta
ttaatagatgttatagttaaaggaagaaaagatggcggcagatatagaagttttacagat
ttttgtcaaagggttgaaaagataaattcttctgtaatgaacaaaagagccattgagagc
ctgatcagatgtggtgccatgaaaagccttggaggaaatagagcgcaattgataaaggta
tttgaaagaataatggatagagcccataaggataaacgcaataatatagatgggcagact
tcattttttgatgtaaacaatagtgatatcctaaaggatgatcttcctgatgtcaaagaa
tattcccaagatgaacttctcaccatggaaaaggagatgctggggatatatgtcagcgga
catcctttagcgccttatgaggaagatttaaagaaagtttctaatatgtccacaatagat
atattgggaacgaaagaagaaggagaaatgtcagcaggcggaatttcagacgggcaggct
gttaccttagggggtataataatatctaaaaagaacaaaataacaaagaataataatatg
atggcatttataacattggaagatttatacggggtaattgaaataattgtttttcctgct
gtttatgataaatttaataaatatataattgaggatagcgtggtggtagttaaaggaaga
atttctttaagcgaggatgaggatcctaaaataatatgtgaatctgttaaaccgctacaa
agatttaataaggataaattatatataaagatacctaatataaacaataaagatatattt
aatgagatcaaatctattcttatgaaatataagggggaaactcctgtgtatatttacatg
gaaaaaaagaataggactattatggcggacagagatctttgggttgattcccatgacagt
gatttgatcgaaaaattggaagatgtactgggaaaagattgtataaaaatttgctaa
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