Spongiibacter sp. IMCC21906: IMCC21906_02218
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Entry
IMCC21906_02218 CDS
T03945
Name
(GenBank) succinate dehydrogenase subunit A
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spoi
Spongiibacter sp. IMCC21906
Pathway
spoi00020
Citrate cycle (TCA cycle)
spoi00190
Oxidative phosphorylation
spoi00650
Butanoate metabolism
spoi01100
Metabolic pathways
spoi01110
Biosynthesis of secondary metabolites
spoi01120
Microbial metabolism in diverse environments
spoi01200
Carbon metabolism
Module
spoi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spoi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
spoi_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spoi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IMCC21906_02218
00650 Butanoate metabolism
IMCC21906_02218
09102 Energy metabolism
00190 Oxidative phosphorylation
IMCC21906_02218
Enzymes [BR:
spoi01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
IMCC21906_02218
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
DAO
GIDA
Thi4
FAD_binding_3
HI0933_like
Pyr_redox_3
NAD_binding_7
NAD_binding_8
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
AKH69881
UniProt:
A0A0F7M412
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Position
complement(2364935..2366707)
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AA seq
590 aa
AA seq
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MSTIRTISFDGVIVGGGGAGMRAALQLAQSGYKTAVISKVFPTRSHTVSAQGGITCAIAS
NDPNDQWQWHMYDTVKGSDYIGDQEAIEYMCQVGPEAVFELDHMGLPFSRTEEGRIYQRP
FGGQSKAFGEGGQAARTCAAADRTGHALLHTLYQGNLKNNTVFFNEWYATDLVKNEDGAV
VGVIAICIETGEVVYVKSKATVFATGGAGRIYASTTNAHINTGDGIGMALRAGFPVQDIE
MWQFHPTGIAGAGTLVTEGCRGEGGYLVNKDGERFMERYAPNAKDLAGRDVVARSMTLEI
LEGRGCGPDGDHVYLKLDHLGEEVLESRLPGICELSRTFAHADPVKEPIPVVPTCHYMMG
GIPTNVNGQALTIDEEGNDTVIPGLYACGEVACVSVHGANRLGGNSLLDLVVFGRASGLF
IEKSLREGIELRDATEADIAKATARLDRVNNSTGGEKIADLRKELQNVMQNHFGVFRRGD
FMQEGVKKLEDLRVRIENAHLEDKSDVYNTARIEALELHNLLEVAEATAIAAEARNESRG
AHARDDFPERDDENWLCHSVYFPKDKRVAKRSVNFTPKTREAFAPKIRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctactattcgtactatttcctttgatggtgtaattgttggtggcggtggagcgggt
atgcgtgccgctttgcaactggctcagtctggttataaaacagcggttatatccaaagtg
tttccaacacgttctcataccgtgtctgctcagggtggtattacctgtgctatcgccagt
aatgatccaaacgatcagtggcagtggcatatgtatgacactgtaaaaggttctgattac
attggtgatcaagaggccatcgagtatatgtgtcaggtaggtcctgaagcagtattcgag
ctggaccatatgggtttgccgttttctcgtaccgaagaaggccgtatttatcagcgccca
ttcggcggtcagtcgaaagcgttcggtgagggtggtcaagctgctcgtacctgcgctgca
gcagaccgtacaggtcacgcgctgttgcacacgctgtatcaaggtaacctcaaaaataac
accgtctttttcaatgagtggtatgcaactgacctcgttaaaaatgaagatggtgctgtc
gttggtgttatcgcgatttgtatcgaaaccggtgaagttgtttatgtgaaatccaaggca
accgtgtttgctacgggcggtgctggtcgtatttacgcgtccactaccaacgcgcacatc
aatactggtgacggtattggtatggcactgcgtgctgggttcccggtacaagatattgaa
atgtggcaattccacccaaccggcatcgccggggcgggcaccttggtaaccgaaggttgc
cgtggtgaaggtggctacctggtaaataaagacggcgagcgctttatggagcgttatgca
cccaatgccaaagacttggcgggtcgtgatgttgttgcgcgttcgatgaccctggaaatt
cttgaaggtcgtggctgtggtcccgatggcgatcatgtttacttgaagttagatcatctc
ggcgaagaagtgctagagagccgtttgccaggtatttgtgaactgtctcgtacctttgcc
catgctgacccagtgaaagaaccgattcctgttgtgcctacctgtcattacatgatgggt
ggtatccccacaaatgttaacggtcaagcccttaccatcgatgaagaaggtaatgacacc
gttattccaggtttgtacgcttgtggtgaagtcgcatgtgtatctgttcacggcgctaac
cgtttgggtggcaactccttgctggatctcgtggtgtttggtcgtgcgtctgggctcttt
attgagaagagtttgcgtgaagggattgagctgcgtgacgcaactgaggcggatatagcc
aaagctactgcgcgtcttgatcgtgtgaataacagcactggcggtgaaaaaatcgctgat
ctgcgcaaagagcttcaaaatgtaatgcagaatcactttggcgtattccgccgcggcgat
ttcatgcaagaaggtgttaaaaagcttgaagatcttcgtgtgcgtattgaaaacgcccac
cttgaagataagagcgatgtttacaacacagcacgtattgaagcacttgagttacacaat
ttgctagaagtggcagaagctacggctatcgctgcggaggcccgcaacgaaagtcgcggc
gcccatgctagggacgatttccctgagcgcgacgatgaaaattggttgtgccattctgtg
tattttccaaaggataaacgggttgctaagcggtctgttaattttactccgaagacgcgt
gaagctttcgcgccgaaaatacgcacctattga
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