Sporosarcina sp. P37: SporoP37_05460
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Entry
SporoP37_05460 CDS
T04826
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
spop
Sporosarcina sp. P37
Brite
KEGG Orthology (KO) [BR:
spop00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spop03019
]
SporoP37_05460
Messenger RNA biogenesis [BR:
spop03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SporoP37_05460
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ARK24186
UniProt:
A0A7U5GVH7
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All DBs
Position
complement(1039104..1040042)
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AA seq
312 aa
AA seq
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MKKLMEHQVGESVDMYLLIKQATKGVTQQGSPFMTLILQDKSGDLEAKLWDTGEEQAQMY
QGATIVKVGGEVHEYRGKNQLRIKAIRPVKEDEGVSIADLVPSAEKSKEVLLDELMQFFF
EMKNPQIQRITRHLLKKHQQKFVLYPAATRNHHDYVSGLLDHVVSMLKLGKAIAELYPTL
NKDLLYAGIILHDIGKVIELSGPVGTQYTIEGNLLGHITIMVNEIAKAAEELEIEGEELM
LLQHMVLSHHGKEEWGSPKRPMLKEAEILHYIDNIDAKMNMLNRVMSKTAPGEFSERVFP
LDNRSFYKPTFE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacttatggaacaccaagtcggcgaatctgttgacatgtatttattaattaag
caggcaacaaaaggtgtcacgcagcaggggagtccgttcatgacattgattctccaggat
aaaagcggggatcttgaagcgaaactttgggatacaggtgaagagcaggcgcaaatgtac
caaggcgcaacgattgtaaaagtaggcggggaagttcatgaataccgcggcaagaaccaa
ttgcgcattaaagcgatccgtccggtcaaagaagatgaaggcgtatccatcgcagattta
gtcccgtctgctgaaaagagcaaggaagtgctgctcgatgaactgatgcagtttttcttt
gagatgaaaaacccgcaaattcagcgcataacgcgccatttgctgaaaaaacatcagcag
aaattcgtgctctatccggcggcaacaagaaaccaccacgactatgtgtccggtttgctt
gatcatgtggtgtcgatgctgaaacttggcaaggcgattgcggagctgtatccgacgttg
aataaggatttactgtatgccggaatcatcttgcatgatatcgggaaggtcattgagctg
tcaggcccagtcggcacgcagtacacgatcgaaggaaatctgctcggccatattacgatt
atggtcaatgaaattgctaaggccgcagaggagctggagattgagggcgaggagttgatg
ctgcttcagcatatggtgctgtctcaccacgggaaagaggagtggggaagtccgaagcgt
ccgatgctgaaggaggcggagattcttcattatatcgataatatagatgcgaagatgaat
atgctgaaccgtgtaatgtcgaagactgcgccgggtgagttctcggagcgtgtcttcccg
ctggataaccgttcgttttataagcctacgtttgaataa
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