Sporosarcina sp. PTS2304: DV702_02940
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Entry
DV702_02940 CDS
T05572
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
spos
Sporosarcina sp. PTS2304
Pathway
spos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DV702_02940 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spos03019
]
DV702_02940 (rny)
Messenger RNA biogenesis [BR:
spos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DV702_02940 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
KH_2
DUF4229
GAGA_bind
Motif
Other DBs
NCBI-ProteinID:
AXH98767
UniProt:
A0A345NUQ9
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Position
656117..657676
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AA seq
519 aa
AA seq
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MIVEILISVLLSLIVGAVVSFFILKNVNDSKVTGAKQTANQIVEEAKREAESVKKEALLE
AKDETHELRLEAENEVRERRTELQKQENRLLQREENLDRKDDTLNKREASLERKEEALLE
RQQHIEEMERKAEELVTTQKTELERISSLTRDEAKRIILDDVEEELSTDIAVMTKESEQR
AKEESERKAREILSIAVQRFAADHVAETTVSVVNLPNDEMKGRIIGREGRNIRTLETLTG
IDLIIDDTPEAVILSGFDPIRRETARLALEKLVQDGRIHPARIEEMVDKSRREVDELIRE
KGEQTTFDVGVHNLHPDMIKILGRLHFRTSYGQNVLKHSIEVAYLSGLLAAELGEDVTLA
RRAGLLHDIGKAIDHEVEGSHVQIGVELATKYKEHPVVINSIASHHGDEEATSVIAVLVA
AADALSAARPGARSETLENYIKRLQKLEEISESYEGVEKSFAIQAGREVRIIVRPDQIDD
ITAHRLARDIRKQIEEELNYPGHIKVTVIRETRAVEYAK
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcgaaatactcatctccgttttgctaagtctcatcgtcggtgcagttgttagc
ttttttatattgaaaaatgtgaacgattcaaaagtgactggtgccaagcaaacagcgaat
caaatcgtcgaagaggcgaagcgtgaagcggagtcagtaaaaaaagaggcactattagaa
gcgaaggatgaaactcacgaactacgccttgaagcggaaaacgaagtccgtgagagaagg
acggaattacagaaacaagaaaaccgtctcttacagcgtgaagaaaaccttgatcgcaag
gatgatacgctcaataaaagagaagcaagtctagagcgcaaagaagaggcgcttttagaa
agacaacagcatattgaagagatggaacgcaaagcggaagaactagtgactacgcaaaag
acagaactggaaagaatttcttcgttaactagagatgaagcgaaacgcatcattttggac
gatgtagaggaagaactgtctactgatattgcggtcatgactaaagaatcggagcagcga
gcaaaagaggaatctgaacgtaaagctagagaaattctttcaattgctgtgcaacgattt
gcagcggatcatgtagctgaaacgacagtctccgttgtcaacttgccgaatgacgaaatg
aaaggtcgtatcattggtcgtgaaggaagaaatatccgtacactcgaaacattaacgggt
attgatttaattatcgatgatacaccagaagcagtcattctgtcaggctttgacccgatc
cggagagaaacagctagattggcactggaaaaattagtacaagacggaagaatacatccg
gctcgtattgaagaaatggtggacaagtctagacgtgaagtggatgaattgattcgtgaa
aaaggagaacaaacgacatttgatgtcggagttcacaatttgcatccggatatgatcaaa
atattaggtcgtttgcatttccgcacaagctatggccaaaacgtcttgaagcactctatc
gaagtagcctatttatcgggtctactggcagcagagcttggagaagacgtgacactagcg
agacgcgcaggtttactgcatgatatcggtaaagcaatcgatcatgaggtagaaggcagt
cacgtacaaattggtgttgaattggcaacaaaatataaagaacatccagtcgtcatcaac
agtattgcatctcaccatggtgatgaagaagcgacttctgttattgcggtattagttgca
gcagcagatgcattatctgccgctagacctggcgctcgaagtgagacgttggagaattat
attaagcgtctacaaaagctggaagaaatttcagagtcatacgaaggtgttgaaaagtca
tttgcgattcaggcaggacgtgaggttcgaatcattgtccgcccagaccaaattgatgat
attaccgcccatcgattagcgcgagatattcgaaaacaaatcgaagaagaattaaactat
ccagggcatattaaagtgacggtcatacgggagacccgtgcagtggagtatgcgaaataa
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