Staphylococcus shinii: JMB28_08965
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Entry
JMB28_08965 CDS
T08256
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
spsd
Staphylococcus shinii
Pathway
spsd00020
Citrate cycle (TCA cycle)
spsd00190
Oxidative phosphorylation
spsd00650
Butanoate metabolism
spsd01100
Metabolic pathways
spsd01110
Biosynthesis of secondary metabolites
spsd01120
Microbial metabolism in diverse environments
spsd01200
Carbon metabolism
Module
spsd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
spsd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
spsd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JMB28_08965 (sdhA)
00650 Butanoate metabolism
JMB28_08965 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
JMB28_08965 (sdhA)
Enzymes [BR:
spsd01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
JMB28_08965 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Pyr_redox_2
HI0933_like
GIDA
FAD_oxidored
NAD_binding_8
AlaDh_PNT_C
DAO
Motif
Other DBs
NCBI-ProteinID:
QRA15777
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Position
complement(1890366..1892129)
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AA seq
587 aa
AA seq
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MAEKKIIVVGGGLAGLMATIKAAEQGAHVDLFSLVPVKRSHSVCAQGGINGAVNTKGEGD
SPTVHLDDTVYGGDFLANQPPVKAMTDAAPKIIHLLDRMGVMFNRTKEGLLDFRRFGGTM
YHRTAYAGATTGQQLLYALDEQVRSYEVDGLVTKYEGWEFLGIVKDDDNMARGIVAQNMT
TAEIQSFGSDAVIMATGGPGIIFGKTTNSMINTGSAASIVYQQGAMYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPDYGNLVPRDIATREIFDVCVNQK
LGINGENMVYLDLSHKDPHELDIKLGGIIEIYEKFTGDDPRKVPMKIFPAVHYSMGGLYV
DYDQMTNIKGLFAAGECDFSQHGGNRLGANSLLSAIYGGTVAGPNAVDYISNIEDSYTDL
DESIYEKHVKEEQEKFDNLLNMKGTENAYKLHRELGEVMTANVTVVRENKTLLETDKKIV
ELMERYQNIDIEDTQTWSNQAVFFTRQLWNMLVLARVITIGAYNRNESRGAHYKPEFPER
NDEEWLKTTLATYQGKTEAPKFTYEPVDISLIPPRKRDYSKASKGGK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagaaaattattgttgtcggcggtggactagctggtctaatggcaacaatt
aaagcagcagagcagggcgcgcatgtagatctgttctcacttgttcctgttaaacgttca
cactctgtttgtgcacaaggtggcattaatggagcggtaaatacaaaaggggaaggagat
tctcctacagtgcatttagatgatactgtttatggcggagatttcttagcaaaccaacca
cctgtaaaagcaatgacagatgcggcacctaaaattattcatttacttgaccgtatgggc
gtaatgtttaatagaactaaagaaggtctattagactttagacgtttcggtggcacgatg
tatcatagaactgcatatgccggtgctactacaggtcaacaattactctatgcattagac
gaacaagtgcgtagctatgaagttgacggtttagttacaaaatatgaaggttgggaattc
ttaggtatagtcaaagatgatgataatatggcaagaggtatcgttgctcaaaatatgaca
actgctgaaattcaatcatttggttcagatgctgttattatggcaactggtggccctggt
attatctttggtaagacaacaaactcaatgattaatacaggctcagctgcttcaattgta
taccaacaaggtgcaatgtacgctaacggtgaatttattcaaattcatccaactgcgatt
cccggcgatgataagcttagattaatgagtgaatcagcacgtggtgaaggcggccgtatt
tggacatataaagatggtaaaccatggtatttcttagaagaaaaatacccagattatggt
aacttggtaccgcgtgatatcgcgacacgtgaaatttttgatgtatgtgtgaatcaaaaa
ttaggtattaatggtgaaaacatggtatatctagatttatctcataaagatccacatgaa
ttggatattaaattgggtggtattattgagatttatgagaaatttaccggtgatgatcct
cgtaaagtaccgatgaaaatcttccctgcagtacactattcaatgggtggattatatgtt
gattatgatcaaatgacaaatatcaaagggttatttgcagctggtgaatgtgatttctca
caacatggtggtaaccgtttaggtgctaactcattactttctgcaatttacggtggtact
gttgctggtccaaatgcagtagactatatttcaaatattgaagattcatatacagattta
gatgagagcatttacgaaaaacacgttaaagaagagcaagagaaatttgataacctatta
aatatgaagggtactgaaaatgcttataaacttcatagagaattaggagaagtcatgact
gcaaatgttacagttgtgcgtgaaaataaaacattattagagacagataagaaaattgta
gaattgatggaacgctatcaaaatattgatattgaagatactcaaacttggagtaaccaa
gctgtattctttacacgtcaattatggaatatgttagtactcgcacgtgtaatcacgatt
ggtgcatataatagaaatgaatctcgtggcgcgcattataaaccagaattcccagaaaga
aatgatgaagaatggttgaaaacaacattagctacgtatcaaggcaagacagaggcacct
aagtttacttatgaaccagttgatattagtttaataccaccgcgtaaacgtgattactct
aaggcgtcaaagggaggtaaataa
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