Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_00961
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Entry
SULPSESMR1_00961 CDS
T04974
Symbol
lcfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Pathway
spse00061
Fatty acid biosynthesis
spse00071
Fatty acid degradation
spse01100
Metabolic pathways
spse01212
Fatty acid metabolism
spse02024
Quorum sensing
Module
spse_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SULPSESMR1_00961 (lcfB)
00071 Fatty acid degradation
SULPSESMR1_00961 (lcfB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SULPSESMR1_00961 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spse01004
]
SULPSESMR1_00961 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spse04147
]
SULPSESMR1_00961 (lcfB)
Enzymes [BR:
spse01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SULPSESMR1_00961 (lcfB)
Lipid biosynthesis proteins [BR:
spse01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SULPSESMR1_00961 (lcfB)
Exosome [BR:
spse04147
]
Exosomal proteins
Exosomal proteins of breast milk
SULPSESMR1_00961 (lcfB)
Exosomal proteins of breast cancer cells
SULPSESMR1_00961 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LtuA
Motif
Other DBs
NCBI-ProteinID:
ASM71789
UniProt:
A0A221JYI0
LinkDB
All DBs
Position
992424..993887
Genome browser
AA seq
487 aa
AA seq
DB search
MNLATWLERSAAADPRAQALYLGTEAVADYGTFDRLARELAGWLGAQGVVPGDRVAIFMA
NVPDFLVVMWGCWYAGVCVVPVNAKLHGREAAFILEDSGAKVVFATTAQAGALRAAKVTV
RIVEDLPQATPVIRPVDRAEFDLAWLFYTSGTTGKPKGVMLSHGNLMAMALSFFADVDQV
KGSDAALYAAPMSHGAGLYNLMHVRVGARHVCPASGGFDPAEILDLAAYFGDVHMFAAPT
MVSRLTSYATASARSGQGLRTVVYAGGPMYLADILAARAALGDVFVQIYGQGECPMAITA
LSRADVAGDDMARVASVGRAQSCVEVGICDSHGAFLPAGQPGEIMVRGAPVMLGYWNNPR
ATADALRNGWLMTGDIGMLDAHGYLTLQDRSKDVIISGGSNIYPREVEEVLQSHPDVREV
SVVGRPHADWGEEVVAFVVGTATKAELDALCRDRIARFKAPKVYVHVDALPKNNYGKVLK
TELRALL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggcaacatggcttgagcggtcggcggcagcagacccgcgtgcgcaggcgttg
tatctgggcaccgaagcggtggccgattatggcacattcgatcggctggcgcgcgaactg
gcaggttggttgggcgcacagggtgtggtgcccggtgaccgggtggccatattcatggcg
aatgtgcccgatttccttgtggttatgtggggctgttggtacgcgggcgtttgtgttgtg
ccggttaacgccaagctgcacgggcgcgaggcggcattcattctggaggattccggcgca
aaggtggtttttgccacgacagcgcaggcgggcgctttgcgcgccgccaaggtgactgtc
cgaattgtcgaggatctgccccaagccacaccggtcatccgccctgtggaccgcgctgaa
tttgatctggcgtggctgttttacacctcgggtaccacgggcaaacccaagggggttatg
ctgtcgcatggcaatctgatggccatggcgctcagcttctttgccgatgtggatcaggtt
aaaggcagcgatgcagcactttatgcggcaccaatgagccacggtgcgggtttgtataac
ctgatgcacgtgcgcgtgggcgcgcgccatgtctgccccgcttctggtggctttgatccg
gcggaaatccttgacctggcagcatattttggcgacgttcatatgttcgcagcgcccacg
atggtctcccgtttgacgtcctatgcgactgcatctgcccggtccggccaaggattgcgc
acggtggtttacgcgggtgggccgatgtatttggctgatattctggccgcgcgcgccgct
ttgggggatgtgttcgtgcagatatatgggcagggcgaatgtccgatggcgatcacggcc
ctgtcacgggcggatgtggcgggcgatgatatggcgcgggtggcctcggtggggcgggcg
cagtcttgcgtcgaagtggggatttgcgacagccacggggcgtttctgcccgctggccaa
ccgggcgagattatggtgcgtggcgcgcccgttatgctgggctattggaacaatccgcgc
gccacggcagacgccctgcgtaacggctggctgatgaccggcgacatcggaatgctggac
gcccacggctatctgacgcttcaggaccgatcaaaggatgtgattatttcaggtggaagc
aacatctatccgcgcgaagttgaagaagtgctgcaaagccatcctgatgtgcgcgaagtg
tcggttgtcgggcggccacatgcggattggggcgaggaggtcgtggcctttgtggttggc
acagccaccaaagccgaactggacgcgctttgccgcgaccgcatcgcgcggttcaaggca
cccaaagtctatgtccacgtcgatgccctgcccaagaacaactacggcaaggtgttgaag
acggaattgcgggcgctgctctga
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