Shewanella psychropiezotolerans: FM037_16150
Help
Entry
FM037_16150 CDS
T07745
Name
(GenBank) PAS domain S-box protein
Organism
spsh
Shewanella psychropiezotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHASE3
Response_reg
PAS
PAS_9
HATPase_c
PAS_4
GAF_2
HisKA
PAS_8
GAF
IL1
HATPase_c_3
PetL
Motif
Other DBs
NCBI-ProteinID:
QDO84454
LinkDB
All DBs
Position
complement(3644542..3650082)
Genome browser
AA seq
1846 aa
AA seq
DB search
MLINLKFRTQLLISYAVILSFMLVIAMVVFFSVKSLEDDLNWVNHTHVVLNKAAKIEAIA
IDMETGMRGYLLAGKSEFLAPYEKGDKIFYEQLDSLMSDVGDNPEQVSQLKEISAIIDEW
HSEVTKPVIALRAEIGDGKSMNDMADVIKEARGKQFFDKFRVQISTFIEREKELLEKSHR
KLESSTNAADLKQLEKLEVHSYRAITKAQVVLASAVDMETGMRGFLLSGQEHFLDPYKEG
SVRFHQLIKELSVFIASNPQQVSLLVESKNIIDNWIGEVVEPLIELRREIGDAKTMDDMA
ELVGEAKGKVYFDKFRVQIQKFKDKELTLLALRKESLADTESLVTNITIYGTLLAIFVGL
GVAFRLTKHIVNQLGGEPAYIAEIARNVSNGDLSAKLEGGDNAQGIFAEMMRMVVTLKDK
TNLAQKIAVGELDQVAKLASDKDMLGIALQEMLNNLNSVADQADAIAGGDFTKEVAIKSD
KDRLGTALHEMKSQIKERNTSLSRSLNLNQGIVNTAIDGIISIKDDGSIISVNSATERMF
KYSAESLIGKNIKMLMPDPFHSEHDAYLSRYKSTGVKTIIGQGREVVALCSDGSTFPIFL
SVGEVKQGEEVMYTGFIRDISAQKKFEMEILKSESLNKGLINTSLDAIISISPEGIILSC
NQATEIMFQYLSKELVGKKINILMPSPYTEEHDTYLSNYLSTGVKKVIGKGRELVGLRRD
GNQFPIFLSVGEVQLETGVVFTGFIRDISEQKKFERDMIKSETLNRGMVNTCLDAILSIS
SKGVIIACNSAAETQFQYSADELMGKKINTLMPSPFTEEHDGYLHNYLTTGVKKVIGKGR
EVIGLKKDGSTFPMYLTVGEVKQGDEIVFTGFVRDITQAKQYEQDLKKTNEDLLKQNELK
NRVSIINELTQGASELNTMADNIISALAEMMQAGHGVLYTYGGEDDGLSLSGSYAFKKRK
VILPNIPIGEGLVGQCGKEKKTILLTQVPGDYIQINSGLGESTPMNVLVVPVLFEDDLMG
VIELATFQTFSDEQIEVIELICSNLGIVINNLRSQERTQTLLLETQMQAEELQAQQEELK
SSNESLLEQTQLLKTSEEELRQQSEELKVSNEELVEKQVFLKRQKDEIEVAKVDLTIKAN
ELALASKYKSEFLANMSHELRTPLNSLLLLAKGLADNKSQHLDEVEVEDAKIIFDGGNNL
LCLINDIMDLSKVEAGKLTIHIEEVNLSVLSRNLKQVFDPIARSRNLKFIINLDEKLPQS
ITSDGQRVEQVLRNLLSNALKFTETGTVSLNIGYAKADTQFSHSSLDANKALSIAVVDTG
IGIPSDKLQAIFEAFQQQDGSTSRKYGGTGLGLTIARELTRLLGGEIQLESSPNQGSTFT
LYLPSKFDLGGIDPKSQGHNEAILSEVKYSTVTDESGSQSKVTYSSAGDPAKHDPVMRLH
PEFIPDDRNNLHEGDRSLLIIDDDKIFAKILRDHARESGYKCLVAGDGRTGIYLAQEYQP
DGIILDIMLPDIDGHKVLEQLKFSLKTRHIPVEIISAHSDDKNAALVQGAIGLQTKPVSQ
EQLLTVFDEIKTFSATELRHVLVVEDDIANQTSIIRLLENSDIDIKCVDNGSQGVEEIMS
GKYDCVILDLGLPDFSGFEVLKRIDASDLARVPPVIIYTGKEITDEEQDELNRYSSTIVI
KGVGSAERLLDDISLFLHDIESRFCDSSRKTIHMLHDEDSMLKGRKVLLVDDDMRNTYAL
SKKLIEIGFDVEMAHNGREAVEQLEQNKNFELVLMDTMMPEMDGYEATRKIREMSDYKQI
PIIALTAKTMAEDREKSLQAGASEYLTKPIDLEKLLSIMRIWLFKH
NT seq
5541 nt
NT seq
+upstream
nt +downstream
nt
atgttgatcaacctcaagtttagaacacagttactaatcagttacgcggtgatcctgtca
tttatgttggttatcgctatggtcgttttctttagtgttaagtctctggaagatgatcta
aattgggtcaatcatactcatgttgtattaaataaagcggcaaaaattgaagccatagcc
atagacatggaaacagggatgaggggctatctgctggcgggtaagagcgagtttctcgcc
ccttatgagaaaggagacaagattttctatgagcagcttgattcactcatgtccgatgtc
ggtgataacccagagcaggtgagtcagcttaaagaaatatcagccattatagatgagtgg
cacagtgaagtgactaagcctgtgattgctctaagagctgagataggcgatggcaagtcg
atgaatgatatggctgatgttatcaaggaggcacgcggcaaacagttttttgataaattc
agagttcagataagtacttttatagagcgtgaaaaagaattattggagaagagtcatcgc
aaacttgagagcagtaccaatgccgcagatcttaagcaacttgagaagttagaagtccat
tcctatcgcgcgattaccaaggcgcaagttgttctggcatcagcggttgatatggagaca
ggtatgcgtggtttcctgttgtcgggacaagagcactttctcgatccctataaagaggga
agtgttcgttttcatcagctgattaaagagttatctgtttttattgccagcaatccgcag
caagtctcattgctagtcgaaagcaagaacatcatagataactggataggtgaggtggta
gagccactcattgagttacgtcgtgagattggtgacgcaaaaaccatggatgatatggcg
gagcttgtgggggaggcgaagggtaaggtttatttcgataagttccgcgtacaaatacaa
aagtttaaagataaagagctcacgctgttagcactgcggaaagaatccctggcagatact
gaatctttggtcactaacattacgatctacggcacattactagccatctttgtaggattg
ggcgtggcgtttagattaacaaagcacatagtgaaccaattaggcggagagcctgcatat
atcgcagaaatagccagaaatgtgtctaatggcgatctgagtgccaaactggagggaggc
gataacgctcaaggtatctttgccgaaatgatgcggatggtagtgacactaaaagataaa
actaatctggcacaaaagattgcggttggggagttagatcaagttgccaagctagcttcc
gataaagatatgttgggtattgcactacaggagatgctgaacaatttaaacagtgttgcc
gatcaggccgatgcgatagctggcggtgattttactaaggaggtggcgatcaagagtgat
aaggacagattaggtacagcactgcatgagatgaagagtcagataaaggagcgtaacact
tctttgtctcgcagcttgaatcttaaccaaggcatagtcaacacagccatcgatggcatc
atctccattaaggatgatggcagcataatatcggttaattccgccactgagaggatgttt
aagtattccgccgagtcactgataggcaagaatatcaagatgttgatgcctgaccccttt
cattcagagcatgacgcttacctaagtcggtataaatccacgggagtgaagactattatc
ggtcaggggcgtgaagttgttgccctgtgcagcgatggcagtacatttcctatctttctc
tcggtgggcgaagtgaagcaaggtgaagaggtgatgtacaccggatttatccgtgatatt
agtgctcagaaaaaatttgagatggagatcttaaagagtgaatctcttaataagggactg
atcaatacttccctggacgccatcatttcaatcagccccgaaggcatcatactgtcctgc
aatcaggcaaccgagattatgttccaatatttgagtaaggaactggttggcaaaaaaatt
aacatcttgatgccgagcccctataccgaagagcacgatacttaccttagcaattacctg
agcacgggcgtgaaaaaagtcataggtaaaggcagggaacttgttggtttgagaagggat
ggcaatcagtttcctatttttctgtctgtgggggaggttcagcttgaaactggtgtggta
tttaccggtttcattcgcgatatcagtgagcagaaaaaattcgagcgagacatgatcaag
agtgaaacactcaatcgaggcatggtaaacacttgcttagatgccattttgtccatatcc
agtaaaggggtgatcatagcttgcaatagcgccgctgaaacacagtttcaatatagtgcg
gatgaactgatggggaagaagatcaatactttgatgcccagcccttttaccgaggagcat
gatggctacctgcataactatctgaccactggggtcaagaaagtgataggtaagggcaga
gaggtcattggcttgaagaaagatggcagcacttttcccatgtacttgacagtgggggaa
gtgaagcaaggagatgaaatagtctttaccggttttgttcgcgatatcacccaagcgaaa
caatatgaacaggatctaaaaaagaccaatgaagatctgctgaagcaaaatgagttgaag
aatcgagtatccattattaatgagttgactcagggggcttcagaacttaacaccatggcc
gataatatcatctcggcgttagccgaaatgatgcaagccgggcatggggtgctctatacc
tatgggggcgaagatgatggcttgagtctctccgggagctatgcattcaagaagcgaaag
gtaatattgccaaatattcccataggtgaggggcttgtaggccagtgcggtaaagagaag
aaaaccatcttattgactcaagtccctggggattatattcaaattaattcagggctgggt
gagagcactccgatgaatgtacttgtggtacccgtcttattcgaagatgatctgatgggg
gtgattgagctggctacatttcaaacattcagtgatgaacagatcgaggtcatcgaactc
atctgcagtaacctgggtattgttatcaataacctcagaagtcaggagcggacacagaca
ttactgcttgaaacccaaatgcaagcggaagagttacaggcacagcaagaggaactgaaa
agttcaaatgagagcctactggaacagactcaactgcttaaaacctccgaagaggagctc
agacagcagagtgaagagctcaaggtgtccaacgaagagctggtagagaagcaagtgttt
ctcaaacgccaaaaagatgagatagaggtggctaaggtcgacctcaccatcaaggccaat
gaactggcgctggccagtaaatataagtcagaatttctggccaacatgagtcatgaactc
aggacgcctctcaatagtttactcctgttagccaaagggttggccgataacaagagtcag
cacttagatgaggttgaagtcgaagatgctaagattattttcgatgggggcaacaatctc
ctctgcctcattaatgacatcatggacctctctaaggttgaagcgggcaagctcaccata
catatcgaagaggtgaacttgagtgtgcttagccgtaacctgaagcaggtatttgatcct
attgccaggagtcgcaacctgaagttcatcattaatctggatgaaaaattgccacagagc
attaccagtgacggccagagggtcgagcaggtgttgagaaacctactgtcgaatgcgctg
aaatttaccgagacagggactgtttctctcaatattggctacgctaaagccgatacccag
ttttctcatagcagtttggatgcaaataaggcgttgtcaattgccgtggtcgatactggt
atcggcataccttctgacaagctccaggccatttttgaggcgtttcagcaacaagatggc
tctactagcaggaaatatggcggaaccggtctgggtctcaccatcgccagggagctgacg
cgtctgttaggtggagagatccagctcgagagctctcccaatcagggcagcaccttcacc
ctatatttacccagtaagtttgacttaggtggcatagaccctaaatctcagggtcacaat
gaagccattctgtctgaggttaaatattcaacagtgacagatgagtccggttctcaatca
aaggtcacttattcctctgcaggggatccagccaagcatgatcctgtcatgcggcttcat
cctgagttcattcctgatgatagaaataacttacatgagggggatcgctctttgcttatc
atcgatgatgataaaatctttgccaagatattgcgggatcatgcccgggaaagtggctat
aaatgtctggttgccggtgacggacgcacggggatctacttggctcaggagtatcaaccc
gatggcatcattctcgatatcatgttacccgatatcgatggccacaaggtactggaacaa
ctcaagttcagtctcaagactcgccatataccggtggagatcatctcggcgcacagtgac
gataaaaatgctgccttagttcagggagctatcggcctacaaactaagcctgttagtcag
gagcaactcttgacggtattcgacgagataaagacattttcagccaccgagctgcgtcat
gtgctggtggtagaagatgatatcgccaatcaaacctctattatcagactgttggagaac
agtgatatcgacatcaagtgtgtcgataacggtagccaaggtgtagaggagatcatgtcg
ggtaaatatgactgcgtcatcttagatctgggcttaccggattttagcggtttcgaagtg
ctaaagcggatcgatgccagtgaccttgcccgagtaccgccggtgattatttatacgggt
aaagagatcaccgatgaggagcaagatgagctgaacaggtactcatccaccatagtcatc
aagggagtgggctctgccgagcggttgctcgacgatatctcactgtttttacatgatatc
gagtctcgtttttgtgacagtagtcgaaagaccatacatatgctccacgatgaagactcc
atgcttaagggccgcaaggtattgctggtcgatgatgacatgagaaacacctacgccttg
tcgaaaaagctgatcgagattggcttcgatgtcgagatggcccataacggtagggaagcg
gtggaacagttagagcaaaataaaaatttcgaattggtgctgatggataccatgatgcca
gagatggatggttatgaggcgacgcgaaaaataagggaaatgagcgattacaagcaaatc
ccaattatagcgttaaccgctaaaacgatggccgaggacagggagaaatctttgcaagcc
ggcgcatccgagtatctgactaaacctatagatttagagaagttgttatctatcatgcgt
atctggctatttaagcactag
DBGET
integrated database retrieval system
