Shewanella psychrophila: Sps_03685
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Entry
Sps_03685 CDS
T05063
Name
(GenBank) PAS domain S-box
Organism
spsw
Shewanella psychrophila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_9
Response_reg
PAS
HATPase_c
HisKA
PAS_8
PAS_4
Hpt
HAMP
Motif
Other DBs
NCBI-ProteinID:
AQS38803
UniProt:
A0A1S6HTD9
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Position
complement(4209650..4213186)
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AA seq
1178 aa
AA seq
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MTFRLKTVLGIALIEGVLLMLLVYTSVDYLKSSNQAEIEKRARSVVALFAAAAKDAVIST
DVSTLQELSNELLVNTQVLYVEIYDRNDLLVRAGEPVLSSAGDQKPVSDEEALVYVGGGF
VDIEDGVLDVKADIIESGFVFGRVELGVSIDEFDQFLARATTRFSSIAGLEMLLVALFSW
LLGSYLTKNLSELKRASKRILKGETGIQIPVNTDDEIGQTTQAFNRMIEKIEKNAQELES
ANIRLSTILEAAVDGFIIIDTKGIIVQVNPAVGHLFGYDKNDLIGQNVSIFMPSHERHMQ
NDFLMSFINSKRGVLQGRGRELVAQHKNGKLFPIDLSVSKMLIDGDVMLLGLVKDLSDIK
RKEAEAKRTESILLATLEASQDALITIDITGRIQEFNDAASHLFGHSREQALGEILEDLI
FVDIERKAFKEGLETFRKTGCGPAIKKSVELMSIRADGTNFPVEMKMIPVQLGDEILLTA
FLHDVSERMQYETELKQAKEQAEIGSKAKSRFLATMSHEIRSPLNAVLGGVELMLDSKLN
KDQRIYAHTAKEAGTALLSTINDILDFSKIEAGQMVLENMSFSPAKMVAQVMQILAPKAN
EKGVNLATFINRNVPDLVKGDAQRLRQVLHNLVDNAIKFSSGGCVSVEMWIPDSHHQEVQ
LHCAVTDEGIGISLPAQKKLFQEFSQVHDQHNTNYKGTGLGLAICSELIIMMGGEIELSS
RLGHGSCFRFDVRLQLEEQRGNYLTHIPAHARVLLVHPDKTFSHLVRKQYSQYGVQTVNV
SQLTDIFKIDEVKGRFNLILIDDTSLSQLSLNLSNQFKRDFLFKDGLIAALMSGLSPEMP
VVMADLGLEQVINKPLSREMLLGLLSGESQDEFDTKKIETLLPELTLRNKRLLLAEDSPS
NRVIAGAMLAKSGFEVEFAHNGKEAVKMSAEHNYGLILMDMRMPEMDGVEATREILLAQP
DTVILAMTANVSKEDVESCLDAGMKDFVAKPVNQVELVKAINKWLPSSDVVDLQSKHTLA
KGKNSHKPCEATVQELSLIKESTIDDIMNAKTDGPNVIDNEAVLSDRLFDELVLSELVDA
LGQESMEGMFSVYLQETHERLEKLELLRLSMNFNEIDDQAHTLKSSSGSFGAQALYEVAK
CLEKSARDKDKQEVESYMLEVQEIGEQTIKAFRERFAA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttagattaaaaacggtattaggtatcgcgttaatcgagggcgtgctcttgatg
ctgctggtttataccagtgtcgattatctcaagagttccaatcaggcagagattgaaaaa
cgcgcacgttcagtcgtggcgctatttgctgcggcggctaaagatgcggtgataagcacc
gatgtgtccaccttgcaggagttgtcgaacgagctactcgtgaatactcaagtcttgtat
gtggaaatttatgatcgtaatgacttgctcgtaagagcgggagagccggtgctaagctca
gctggtgatcaaaagccagtcagcgatgaagaggcgctagtttatgtgggtggcgggttt
gttgacatagaagacggtgtgcttgatgtgaaggccgacattattgagtctggatttgtg
ttcggtcgtgttgaactgggagtcagtatcgatgagttcgatcagtttttagcccgagcc
acaacgcgttttagttcgattgcggggctagagatgttattggttgcgcttttttcctgg
ctattgggcagttacttgaccaagaatttgagtgaactaaaacgggcatctaaaagaata
ctcaagggggaaaccggaattcaaattcctgttaataccgacgatgaaataggtcaaact
acccaggcattcaatcgtatgattgaaaaaattgagaagaatgctcaagaacttgagagc
gccaatattcgcctcagtactattttagaagccgccgtagatgggtttatcatcatagac
accaaggggatcatcgttcaggttaatcccgccgtcggtcatctttttggttatgacaag
aatgacttgattggacagaacgtatccattttcatgcccagtcacgaacgacacatgcaa
aatgatttcctgatgagttttattaactctaaaagaggggtgctacaaggcaggggaagg
gagctggtggcacaacacaagaatggtaagctgtttcccatcgatctgtctgtctctaag
atgttgattgatggcgacgtcatgttactgggcttagtgaaagacttaagtgatattaaa
cgaaaagaggccgaggctaaacggacagagtctatattgcttgcgacgcttgaggcgagc
caagatgcattaattaccatagatatcacagggcgtattcaagagtttaatgatgcggcc
agtcatttgtttggccatagtcgtgaacaggctctaggcgagattttagaggatctgatt
tttgtcgatatcgagagaaaggctttcaaggaagggctggagacgttcaggaagactggc
tgtggtccagcgataaagaagagcgtagagcttatgtctattcgggctgatggcactaac
tttccagttgagatgaagatgatcccggtacaactcggcgatgagatcttacttactgct
tttttacacgatgtttcagaacgtatgcagtatgagactgagttaaagcaagctaaagag
caggctgaaataggcagtaaggctaaatctagatttctggcgactatgagtcatgaaatt
cgttctccactgaacgccgtattaggtggagtggaactgatgctagactctaaactgaat
aaagaccaacgaatatacgcgcatacggctaaagaagccggtactgcactactgagtacc
atcaacgatattctagatttttcaaaaattgaagccggacagatggtgttggaaaacatg
agtttctcgccagctaaaatggtggctcaggtgatgcagattttagcgcctaaagccaat
gagaaaggcgtcaacttagcgacatttattaatcgaaatgtaccggatctcgtcaagggc
gacgcccaacgattgcgtcaggtactacataatcttgtggataatgcgattaaattctcc
agtggtggctgtgtctctgtggagatgtggatccctgacagccatcaccaggaggtgcaa
ctgcattgtgccgtcacagatgaaggcattggtattagccttccggctcaaaagaaattg
tttcaagagtttagtcaggttcatgatcagcataataccaactataaaggcaccggatta
ggtttagccatttgttccgagttaatcatcatgatgggcggagagatagagctgagcagc
cgtctgggtcatggcagttgcttcaggttcgatgtacgtttacagctagaagaacaaaga
ggcaattatcttacccatattcctgctcatgccagagtactactggttcaccccgataag
actttttctcatctggtgagaaaacagtacagccaatatggggtgcagaccgttaatgtg
agccaattgacggacatctttaaaatagatgaagtgaaaggcaggtttaaccttatattg
attgatgacactagcttatctcagttgagcttaaatttatcgaatcaatttaagcgagac
tttctattcaaagatggcttaattgccgccttgatgtcgggattaagtcctgaaatgccc
gtggtcatggccgatctcggtttagagcaagtgatcaataaacccttgagtagagagatg
ctgttaggcctgcttagtggtgaaagtcaggatgaatttgataccaaaaagatcgagact
ttattgcctgagctgacattgaggaataaacgtctattattggccgaggacagtccctca
aatcgagtaatcgccggagccatgttagctaaatctgggttcgaagttgaatttgcccat
aacggaaaagaggccgttaaaatgtcagccgaacataactatggcttgatattaatggat
atgcgtatgcctgagatggacggcgttgaagcgacgcgagagattttactcgctcagcct
gacactgtgatattagccatgacggccaatgtatcgaaagaagacgtcgagtcctgcctc
gatgcagggatgaaagactttgtggcgaaacccgttaatcaagttgagctggtgaaggct
atcaataagtggcttccctcctcagatgtcgttgacctgcaaagtaaacatactctagca
aaggggaaaaacagtcataaaccttgtgaagcgactgttcaggaattaagcttgattaaa
gaatccacgatagacgatatcatgaatgcgaaaacagatggcccaaatgtgatagataat
gaagcggtcctttcggacaggttattcgacgagctggtgctgtcagagttggttgatgcc
cttggacaagagtcaatggaaggcatgttcagtgtctatcttcaagagacccacgagcgt
ttagagaagttagaattattaagactatcgatgaattttaacgagattgatgatcaggct
cataccttaaaaagtagctctggaagctttggcgcacaagccctttatgaagtggctaaa
tgcctagaaaaaagtgcccgagataaagataaacaagaggtcgagtcctatatgctagaa
gtacaagagattggagagcagaccataaaagcctttagggagcgcttcgctgcttag
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