Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150: SPA2088
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Entry
SPA2088 CDS
T00219
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spt
Salmonella enterica subsp. enterica serovar Paratyphi A ATCC9150
Pathway
spt03030
DNA replication
spt03430
Mismatch repair
spt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SPA2088 (holA)
03430 Mismatch repair
SPA2088 (holA)
03440 Homologous recombination
SPA2088 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spt03032
]
SPA2088 (holA)
03400 DNA repair and recombination proteins [BR:
spt03400
]
SPA2088 (holA)
Enzymes [BR:
spt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SPA2088 (holA)
DNA replication proteins [BR:
spt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SPA2088 (holA)
DNA repair and recombination proteins [BR:
spt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SPA2088 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
AAV77982
UniProt:
A0A0H2WQH2
LinkDB
All DBs
Position
2173944..2174975
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTD
WGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKA
QENAAWYTALADRSVQVSCQTPEQAQLPRWVATRAKAQNLQLDDAANQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALQRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggttgtatcctgaacaactccgcgcgcagctcaacgaagggctgcgtgcggca
tatctgctattgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctg
gcggctgcgtcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgac
tggggatcgcttttctcactctgccaggcgatgagtctgttcgccagtcgtcaaacgctg
gtgctgcaactgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccacgctg
agcgagctgctgcatgacgacctgttattaatagtacgtggaaacaagctcaccaaagcg
caggaaaacgccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcag
acgccggagcaggcgcagcttccccgctgggtggccaccagagcgaaagcacagaatttg
caactggatgacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcg
ctggcgcaggcgctggaacgactgtcgctgctttggcctgacggtaagttaacgcttcct
cgcgtggagcaggccgtcaatgacgccgcccactttacccctttccactgggtggatgcg
ttactgatggggaaaagcaaacgcgcgctgcatattctgcaacagctacgccttgaaggc
agcgaaccggttattctgctgcggaccctccagcgagagctgctgctactggtaaatctc
aaacgtcagtccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaa
aaccgtcgccccatgatcggcgacgcgttgcagcgtctccatcctgcgcagcttcgccag
gccgtgcagttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggta
tgggcagatcttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtattt
attgatgggtga
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