Strongylocentrotus purpuratus (purple sea urchin): 105436972
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Entry
105436972 CDS
T01019
Name
(RefSeq) RNA-binding protein cabeza-like isoform X1
KO
K13098
RNA-binding protein FUS
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
spu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105436972
09122 Translation
03015 mRNA surveillance pathway
105436972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spu03041
]
105436972
Spliceosome [BR:
spu03041
]
Complex A
Other components
Complex A specific factors
105436972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
zf-RanBP
Motif
Other DBs
NCBI-GeneID:
105436972
NCBI-ProteinID:
XP_030827968
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSADSQYAGYGATQQSYGYGGTAGYQQPAAQPVASTGYQQPAAQYGTPGYGQTAAAPAPA
AAVAAAPQASTAGYDYSQQQSQPQGQQSYSTSTYSQPAAQQQPQAYSAGFSQQAAASTPS
TGYAQPPAAQPSYSQPAAAAPSNYSQPPAQPQQSQGYQQQPPPQQSQPGGYNQGGYQHPS
SGGYSQPQSQQSGGGGGGGGGYQQGSGQGGGYQQGGGYNQRPGGPGPQGGGGGYRPPPQG
GPSGGGGGGGYNRGGRDDGGRGGSGFGGGRGGGGGGGGRDGGFGDRGGGRGGFNKYGGDG
GGGGGGGGGGFGRDSDNGYNKGGGEMEVQHDTIFISGMLPNSVDEDKIKEHFGQIGIVKL
DKRTNKDRIWIYKNKQTHEPTGEATVTYEDPHTATSAIDWFNGKPFNGATIKVELAQRPA
NRLGGGRGGRGGGGRGFDRGGDRGGRGGRGMDRGGRGGGGRGGGRGGPGGGGSFREGDWE
CSSCGNKNFGWRQNCNRCSEAKEGGDGGPDMGGGMRGGRGGGFRGRGGDRGGDRGRGGFG
DRGGGRGGFGGGRGGGFRGGRGGPGGPGGPGGPGGFKMGGDRMGGDRRDRRDRPY
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagattcacaatacgctggttatggcgccacccaacagtcgtatgggtatgga
ggcactgctggatatcaacagcctgcagctcaacctgtagctagcactggttaccaacaa
ccagcagctcagtatggaacgcctggatatggtcaaaccgcagccgctcctgctcctgca
gcagccgtagccgcagcaccccaggcctctactgctggctatgactactctcaacaacag
agtcagccacaaggtcagcagtcttactcaactagcacgtacagtcaaccagccgcacag
cagcaaccacaagcatattcagctggtttcagccagcaggccgctgctagcacgcccagc
acagggtacgcccagcctcctgcagctcagccatcatacagccagccagctgcagccgcc
ccgtcaaactacagccaaccccctgcccagccgcagcaatcccagggctaccagcagcag
ccgccgccgcagcagagtcaaccaggaggctacaaccaaggaggctaccagcacccgagc
tctggaggctacagtcaaccacaaagccagcagtcaggtggtggtggtggtggaggtggt
ggctatcaacaaggcagtggacaaggaggtggatatcagcaaggtggagggtacaaccag
cgacctggagggcctgggccacagggaggtgggggaggatacagaccccctccccagggt
ggaccaagtggcggtggaggaggaggaggatacaaccgaggaggtcgtgatgatggaggc
cgtgggggcagtggtttcgggggaggacgaggaggtggaggaggaggagggggtcgtgat
ggaggattcggtgatcgtggtggcggaaggggtggattcaataagtacggtggtgatggc
ggtggtggtggaggaggaggcggcggtggattcggccgcgactctgacaatggatacaac
aaaggaggtggagagatggaagtacaacacgataccatattcatcagcggaatgctgcca
aacagtgtcgatgaagacaagatcaaggaacacttcggacagatcggtatcgtcaagctt
gataagaggacgaacaaggataggatctggatctataagaacaagcaaacacatgaacct
acaggagaggctacagtgacctatgaagatcctcatacagctacatcagctattgattgg
tttaatggcaagcccttcaatggtgctaccatcaaggtagaactagcccagcgtccagcc
aaccgactcggtggtggtcgcggcggtcgtggaggtggtggaaggggcttcgataggggt
ggtgatagaggtggacgtggagggcgtggcatggacaggggtggccgaggtggtggtgga
cgtggaggtggacgcggaggacctggaggtggtggatcattccgtgaaggagattgggaa
tgctcctcgtgtggtaacaagaactttggatggagacagaactgtaacagatgctcagaa
gcaaaggaaggaggtgatggtggtcccgacatgggtggcggcatgaggggaggccgtgga
ggtggattccgtggtcgtggtggtgatcgtggaggtgatcgtggacgtggagggtttggt
gatcgcggtggtggtcgtggaggttttggaggaggacgaggtggtggattccgtggtggg
cgtggcggtcccggaggaccaggtggacccggtggtccaggagggtttaagatgggtgga
gataggatgggcggagataggcgagatagaagggataggccttattag
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