Strongylocentrotus purpuratus (purple sea urchin): 115919784
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Entry
115919784 CDS
T01019
Name
(RefSeq) ATP-dependent RNA helicase DDX54-like
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spu03009
]
115919784
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115919784
Ribosome biogenesis [BR:
spu03009
]
Eukaryotic type
Pre-60S particles
Helicases
115919784
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
115919784
NCBI-ProteinID:
XP_030829836
LinkDB
All DBs
Position
Unknown
AA seq
893 aa
AA seq
DB search
MAKKGGHVKRKRSEKAIKKQDSGIEPEEDDQPASPKRAKVSAGFPTIDGYSSDADIDTRA
LVKQQNRKKKKSGGFQSMGLSHAVFKGIMKKGYKIPTPIQRKCIPIIMEGQDVVGMARTG
SGKTAAFLLPMLERLQRRSAQSGARALILSPTRELALQTLKFTKELARYTDLRSEVILGG
DRMDDQFAALHENPDILIATPGRLLHVLVEMDLKLMQVEYVVFDEADRLFEMGFAEQLNE
ILSRLPDNRQTLLFSATLPKSLVEFASAGLSEPVLVRLDVESKISEQLKSMFLYTRSNDK
TAVLLHLLRDVIQPNQLTVVFLATRHHVDYVRELLEQAGISNTYIYSALDQAARKINVAK
FTHKKTHILLVTDIAARGIDIPMLDVVINFHFPGKPKLFVHRVGRVARAGRTGTAYSMVA
PDELSYLIDLHLFLGKDIAFFKNDDKMSEEDVSGKLGRVPQSVVDDEESVLRNLHKMSSD
LTNLKRPAFNAMKNYLRSRPLPSPASVKRSKEIDPMDIAYHPMYGIQDSDLESTRVQLVD
EVKGYKPRATIFEINSTSKNSAHGVMQSKRRLHNTVINRNVQRLEEKKKEEQAMRRVAME
TEDDADAENAFSVVIGPAGKKRKDVGGAPQGSLPFTQSAVRDENVFIAYTAPDKQQEQGL
SIENNFEKQAAGAVLDFTQDESREMRKQQQRVKWERKKKKFVGDGGKDGKQKKIMTESGK
YISASYKKNIYKEWLNKSKADSRDHHQSDSDNEDGDRSGLNKGSITGNRVRYGNGRGGKH
SGTKRRGRHEDSGTERGQGSKGQHGGELRRKEEILKDRKIKGRKREQSRPRAQREGGRGG
GRGGGRGSGRGRGGGRGGGGGRGGFGRGGGGGRGGGGGRGGGRGGGRGGRGRR
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaaggaggacatgtaaaacgtaaaagaagtgaaaaggccatcaaaaagcaa
gatagtgggattgaacctgaagaagatgaccagcctgcatcaccaaaacgggcgaaggtt
tcagctggatttccgaccatcgatggctattcttcagatgcagacatagataccagagct
ctggtcaaacagcagaacagaaaaaagaaaaagtctggaggattccagtctatgggtctt
agccatgctgtttttaaaggtatcatgaagaaaggatacaaaattcctacacctattcaa
agaaaatgcatacccattatcatggaggggcaagacgttgtgggaatggctcgaacaggg
agtggcaagacagcagcttttcttcttcctatgttagagcgactccagagacgatcggcc
cagtctggtgcaagagctctaatcctctcacccacgagggagctagcacttcaaacgctt
aaattcaccaaggagcttgctcgctacacggacctgaggtcagaggtcatcctgggaggt
gaccggatggacgaccagtttgctgccctccatgagaaccctgacatcctgattgccacc
cctggtcgtcttctccacgtcctagtcgagatggacctcaagctcatgcaagtggagtat
gtggtctttgatgaggcagacaggttatttgagatgggttttgcagagcagctgaatgag
atcttatccaggttacccgacaaccgacagaccttgctcttctcagccaccctacccaag
agtctggtagagtttgccagcgctggtctgagtgaaccggtgctggtcaggctggatgta
gagtcaaagattagtgagcagttaaagagtatgtttctgtacacccgaagcaatgataag
acagcggtgttgctgcacctgttacgcgatgtcatccaacccaaccagttgactgtcgtc
ttcttagctactaggcatcatgtggattatgttagagagttgctagaacaggcaggcatc
agcaacacctacatctacagcgcccttgaccaagctgcgaggaagatcaacgttgccaag
ttcacccataagaagactcacattctccttgtgacggacattgctgcccgaggtatcgac
atccctatgcttgatgttgtcatcaatttccacttccctggcaaaccaaagctctttgta
cacagagttggtcgtgttgccagagcaggaaggaccggtacagcgtactctatggtagca
cctgatgagctttcatacctcattgatcttcacctattcctgggcaaggacattgctttc
ttcaagaatgatgacaagatgtcagaagaagatgtctcgggtaagcttggtcgggttcct
cagtcggtggtcgatgatgaggagagtgttctgaggaacttacacaagatgagctcagat
cttactaatctgaagagacccgccttcaatgccatgaagaactacctcaggtcacgacct
ttgccctctccagccagtgtcaagaggtcaaaagagattgacccaatggacatcgcctat
catcccatgtatggaatacaagacagtgacctggagagcacaagagtacagcttgttgat
gaagtcaagggttataaaccacgcgctacaatttttgagatcaactccacctccaagaac
agtgctcatggtgtcatgcaatccaagaggaggttacacaacactgtgatcaacaggaac
gtacagaggctcgaggagaagaagaaagaggagcaagcaatgagaagggttgccatggaa
acagaagatgatgcagatgctgagaatgcattctccgttgtgatcgggccagctggcaag
aagaggaaggatgtgggtggtgctcctcaggggtcattgccttttactcagagtgctgtc
agggatgagaatgtgtttattgcatacacagcaccagacaaacagcaagaacaagggttg
agcatagagaacaactttgagaagcaagcagctggagcggtgctagacttcacacaagac
gagtcgagggagatgagaaaacaacagcagagagtcaaatgggagaggaaaaagaagaag
tttgtaggagacggagggaaagatggcaagcagaagaagattatgacggaaagtgggaag
tacatctcagcatcctacaagaaaaacatatacaaggagtggttaaacaagagtaaggcc
gattcacgggatcaccaccaatctgacagcgataacgaagatggtgacaggtcaggtctt
aacaaaggaagcatcacaggaaacagagttcgttatggtaacgggcgagggggcaagcac
tcgggaacgaaaaggaggggtcgtcatgaagactctggcacggagagaggtcaggggtca
aagggtcagcatgggggtgaactacggagaaaggaggagatcctgaaggacaggaagatc
aaggggcgcaaacgagagcagagtagacccagggcccagcgagaaggggggagaggtgga
ggtagaggaggtggaagaggcagtggtagaggtaggggcggtggtaggggtggtggtggt
ggaaggggtgggtttgggcgtggtggtggtggcggtaggggaggtggcggtggtaggggt
ggtggtaggggaggtggaagaggaggcagaggcaggaggtga
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