Strongylocentrotus purpuratus (purple sea urchin): 115928339
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Entry
115928339 CDS
T01019
Name
(RefSeq) LOW QUALITY PROTEIN: cleavage stimulation factor subunit 2 tau variant-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115928339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
115928339
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
115928339
U7-dependent histone pre-mRNA processing factors
115928339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
Motif
Other DBs
NCBI-GeneID:
115928339
NCBI-ProteinID:
XP_030851361
LinkDB
All DBs
Position
Unknown
AA seq
685 aa
AA seq
DB search
MLFFSQHLLTTVGNIPYEITEEKLKDIFSEVGPVISFRLVFDRDTGKPXGYGFCEYQDQE
TALSAMRNLNGYELSGRSLRVDNATSEKNREELKTALQQSQPPPESPYGDSVAPQEAPEA
ISRAVASLPPEQMYEVMKQMKIVIQNNPVEARNMLLQNPQLAYALLQAQVVMRIVDPNVA
MTLLHRQTDAPQPLIPPEMNQGPGPHPGQHQGPGPQGNQGMGMGGPRPDHQMGPGGMNQR
GMNPNMGPGMNQGSMGPRGMGPQGMGHQDMGRGGMGPQDRNMQGGMQRGGMGPGDMNRGG
MGQGDMNRGGMGQGDMNRGGMGPGDNMNRGGMGPGDNMNRGGMGQGETNRGGMGPGEMNR
GGMGQGEANRGGMGPGEGNRGNMGQSDMNRGGMGPGDMGRGGMGPGDMNRSGMGPGDMNR
GGMGPGDMGRGGMGPGDMNRGGMGPGDMNRGGMGQQDTGMGGMGQGRGPGMGMNEMGRGG
GPDMNRGMGSGQQGPQGRVHGGMDQGRMNMGQGGGGPAGPGGPGMSPNMMNQDMQMNRGG
MGPGPRGGGPPDSMVHDPRRQDPRGPGAAGGPGGGGGVGGGFERGEPHGMGGMRPGGMGA
GDPRMTDPRAAERSPITASTNLSQLAQNINLSQTQPTQQDQEKAALIMQVLQLSPEQINL
LPAEQRASIMVLKEQISRSQGGAPS
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgctttttttttctcaacatcttttgaccacagtggggaacattccctatgagataaca
gaagagaaactgaaggatatcttctcagaggtcggccctgtgatcagcttccgtctcgtc
ttcgatcgggacactggcaaacccnagggatatgggttctgcgagtaccaggaccaagag
acggcgctctcagctatgcgaaacctgaacggctacgagctgagtgggaggagtctcagg
gttgataatgctaccagtgagaagaacagggaggagcttaaaactgcattacagcagagt
cagccacctcctgaatccccctacggtgattctgtagcaccccaggaagccccagaagcc
atctcaagagcggtggccagcctgcctcctgaacagatgtacgaggtcatgaaacaaatg
aagattgtgattcagaacaaccctgtggaagcccgtaacatgttactgcagaatcctcaa
ctggcttatgccttgcttcaggctcaggtcgtcatgcgcattgttgaccctaacgttgcc
atgactttgcttcacaggcagacagatgcaccacaacctctgattccccctgaaatgaac
caaggtcctggtcctcaccctgggcagcaccaaggcccaggaccccagggaaaccaaggc
atgggtatgggtggaccaagaccggatcatcagatgggcccgggtggtatgaaccagagg
ggtatgaatcctaacatgggtccaggaatgaaccagggctccatgggaccaagagggatg
ggtccacagggcatgggacaccaggacatgggtaggggcggtatgggccctcaggatagg
aacatgcagggaggtatgcagaggggtggaatggggcctggagatatgaacaggggcggt
atgggccaaggagatatgaacaggggcggtatgggccaaggagatatgaacaggggtgga
atgggcccaggggataatatgaacaggggtggtatgggacccggggataatatgaacagg
ggcggtatgggccagggagaaacaaacaggggtggcatgggaccaggggaaatgaacagg
ggtggtatgggccagggagaagcaaacaggggtggtatgggcccaggagaaggtaatcgg
ggcaatatgggccaaagcgatatgaatcgtggcggtatgggcccgggggacatgggccgt
gggggaatggggcctggagacatgaaccgtagtggcatgggcccaggggatatgaacagg
ggtggtatgggcccaggggatatgggcaggggcggcatggggccaggtgatatgaatcgg
ggtggtatggggccaggtgatatgaatcggggcggtatgggccagcaagatacaggcatg
ggaggtatgggtcaaggtcgagggccagggatgggtatgaatgagatgggtcgaggggga
ggtccagacatgaacaggggtatgggttccggacagcagggtccacagggcagggtacat
ggaggtatggaccagggccgaatgaacatgggtcaaggaggaggaggaccagctggacca
ggaggacctggaatgagcccaaacatgatgaatcaagacatgcaaatgaaccgtggcggt
atgggaccaggcccaagaggcggtggacctccggacagcatggtccatgatccccgcaga
caggaccccagaggaccaggagcagcgggtgggccaggaggaggaggaggggtaggaggg
ggctttgaaaggggtgaacctcatggcatggggggcatgaggcccggtggtatgggagcc
ggtgacccacgcatgaccgaccccagagcagcagaaaggtcacccatcacagcatcaacc
aatctttcgcagcttgcccagaatatcaacctatcacagactcagcctacacaacaagat
caagaaaaggctgctctgatcatgcaagtgttacagctgtcgccggagcagatcaacctc
cttcccgccgagcagagagctagcatcatggttctcaaggagcagatctctcgcagtcag
ggaggggcgccatcttag
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