Strongylocentrotus purpuratus (purple sea urchin): 576753
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Entry
576753 CDS
T01019
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03440
Homologous recombination
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
576753
03460 Fanconi anemia pathway
576753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spu03032
]
576753
03400 DNA repair and recombination proteins [BR:
spu03400
]
576753
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
576753
DNA replication proteins [BR:
spu03032
]
Eukaryotic type
DNA Topoisomerases
576753
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
576753
FA (Fanconi anemia) pathway
576753
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
zf-GRF
Toprim
zf-C4_Topoisom
Lar_restr_allev
Rng_hyd_C
Motif
Other DBs
NCBI-GeneID:
576753
NCBI-ProteinID:
XP_030841045
LinkDB
All DBs
Position
Unknown
AA seq
1140 aa
AA seq
DB search
MLIWKSCLRISLCTYINMARGHATKVLNVAEKNDAAKSIADVMSHGRYRRREGFSKFNKI
YEFDYSMLNQQCDMTMTSVSGHLLNYEFALAYQKWHSCNPVALFDAPVQKGCPENYKDIK
RTLEREARAADVLVIWTDCDREGENIGYEVIDVCKAVKPRLDVYRARFSEITPQSITRAC
ANLVRPDQRVSQAVDVRQQLDLRIGAAFTRFQTLRLQRVFPDLLQNQLISFGSCQFPTLG
FVVERYKQVEAFIPETFYKIKVTHKTEDGLVEFHWKRHRLFDQLACQVFYEICTENPLAT
VVDERSKPKSKWRPLPLDTVELEKLAARKLKISAQQAMKIAEKLYTQGFISYPRTETNIF
PKELNLVPLIEKQTQDAQWGAFAGNLLQQGPHPRQGKKTDHAHPPIHPTKYNGNLQGNEQ
KVYELIVRHFLACCSQDAQGKETIVNITIAEEEFTATGLMIIARNYLDVYPYEKWNAKII
PVYDRGQTFEPTSLEMVDGQTQAPPLLTEADLITLMDKHGIGTDATHAEHIETIKSRLYV
GVRPDGRFVPGELGMGLCEGYDNMGYELSKPNLRAELESDLKRISDGQKNPEDVLAEQVD
KYKQVFIEAARKATMLDSALEQYLGQPAQSHNATSLQVSAPSIVRKCPHCSEPMTLKERK
AGGWMVSCMGYPGCKAAVWFPAVIESADVSDTVCQQCQPGPVNKIKFKFKRGSVPPMIPL
EYEGCIGGCDTTLKDVLDLNLAYLRPRDQSYQASGNRTANRGGGGGGGRGGGGGGGRGGG
GGGGGRGGGGGAGGGFSNSTRGGGGGRPVGGSSVDIDDNEASHWFNSSSAPSSALSSSSS
TRNGQFGGNRGGGGRGGGRGGGGGDGGWNDNSSSRSYSTSSFGNSAARTPLSQIPSRNGS
KSSSSTSNAVVCSCGQDAVQLTVRKEGPNQGRQFFKCQSGGCNFFLWSEENTENTSTPDL
GNTGRNNTSPSFSGGFDTPATGLNGMADRSSGYGTDGGDQGSSTNVWGEVMCQCNAAAVQ
RTVQKEGPNQGRQFYVCGKPREKQCSYFQWADEEPKSGGGGGGGGGFKGSSNFSRGGGSA
GGQAKNWSSSSFQGGRGGRGRGGGGGGRGGGGGGGQGKRRKPTCSICHEEGHTKRSCPQK
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgttgatttggaagtcttgcttgaggatctctttgtgcacctacatcaacatggcacga
ggacatgcaaccaaggttctgaatgtagcagagaagaatgatgctgccaagtcaatagca
gatgtcatgtctcacggtagatacaggaggagagaaggcttctcaaagttcaataagatt
tatgagtttgactacagcatgttgaatcagcaatgtgatatgaccatgacgtcagtctcc
gggcatctcttgaactatgaatttgctttggcctatcagaaatggcattcatgcaatcct
gtggccctctttgatgctcctgtgcagaaaggatgcccagagaactacaaagatattaag
agaacgttagagagagaagcaagagcggctgatgtcctcgtcatatggactgattgtgat
agggaaggggagaatattggctatgaggtcattgatgtttgcaaagcagtgaaacctaga
ctggatgtatacagagcccggttctccgagattactccgcaatccatcacccgtgcgtgt
gcgaatcttgtcagacctgaccagcgtgtttcccaagcagtggacgttaggcagcagctt
gacctaaggataggtgctgctttcacccgattccagaccctacgcctccagagagtcttc
cctgatcttctgcagaaccagctcatcagcttcggctcttgtcagttccctaccctgggt
ttcgtagtggaacgctacaagcaggttgaagccttcattccggaaacattctataagatc
aaagtaacacataagactgaagatggcctggttgagttccactggaagaggcataggtta
tttgatcaactggcctgtcaagtcttctacgaaatctgtactgagaaccctcttgcaact
gttgttgatgagcgcagtaaacccaagagtaaatggagaccactgccactggatactgtg
gaactagagaagcttgctgcccgtaagctgaagatcagtgcccagcaggccatgaagata
gcagaaaaactttatactcagggattcatcagctatcctcgtacagagaccaacattttc
ccaaaggagctcaatttagttccattgattgagaagcagactcaggacgcccagtgggga
gcatttgccggtaatcttctgcagcaaggcccccatccaaggcagggtaagaagactgac
cacgcccatcctccgatccaccctaccaaatacaacggtaacctacagggtaatgagcag
aaggtctatgagcttattgtcagacacttcttagcttgctgctctcaggatgcccaagga
aaggagaccattgttaacatcaccatcgccgaggaggagttcactgctacgggactgatg
atcatagctaggaactacctggatgtctacccgtatgagaaatggaatgctaaaatcatc
cccgtttatgacagaggtcagacttttgaacccacttcgctggagatggtagatggtcag
acacaagcccctcccctactgactgaagctgatctcatcaccctcatggataagcatggc
atcgggaccgatgctacacacgcagagcacatcgagaccatcaagtctcggctgtacgtg
ggagtgcgtccagacggccggtttgtgcccggtgagctcggcatggggctgtgtgagggc
tatgataacatgggctacgagctgtctaaaccaaacctcagagcagaactcgaatcagat
cttaaaagaatatctgatggtcagaagaaccctgaggatgttcttgctgaacaggtggat
aaatacaagcaggttttcatagaggctgcaagaaaggcaaccatgttagacagtgcattg
gaacagtatttgggtcagcctgctcaatcgcacaatgcaacctcattacaggtgagtgcg
ccctctattgtccggaagtgtcctcactgcagcgagccgatgaccctgaaggagaggaaa
gctgggggatggatggttagctgtatggggtacccgggatgcaaggcagcggtctggttc
ccggccgtcatagagtctgctgatgtgtctgataccgtctgtcagcagtgtcaacctgga
ccagtcaataagatcaaattcaagttcaagagaggatctgtacccccaatgataccactt
gaatatgaaggatgcataggaggatgtgacacaactcttaaagatgtgctggatctcaat
ctagcttacctcagaccaagagatcagtcttaccaagcttctggtaacagaactgcaaac
agaggaggaggaggaggaggaggaagaggtggtggtgggggaggcggaagagggggtggt
gggggaggaggaggaagagggggaggaggaggtgctggaggaggattttccaacagcacc
agaggaggaggtggaggtagacctgtagggggaagctctgtggacatagatgataatgaa
gcatcacattggttcaactctagcagtgccccatcgtcagcattgtcatcttcatcatct
accagaaatggacagtttggaggtaataggggaggaggaggaagaggaggaggaagagga
ggaggaggaggagatggaggatggaatgataattcttcatcaagatcatactccacgtca
tcctttggaaattctgccgcaaggactcccctttctcaaattccatcaaggaatgggagt
aaaagtagtagtagtacaagcaatgcagtggtatgtagctgtggtcaggatgctgttcag
ctcactgtgagaaaagagggcccaaatcaaggtcgccaatttttcaaatgccagtcaggg
ggctgcaacttcttcctctggtctgaagaaaacacagagaatacctcaaccccagatctt
ggcaacaccggtcgaaacaacacaagtccctcattcagtggtggttttgacacccctgcc
actggcctgaatggaatggccgatagatccagtgggtatggaactgatggaggggaccag
ggttcttccactaatgtctggggggaggtcatgtgccagtgcaatgcagctgcagtacaa
cgtactgtacagaaggagggtccaaaccaaggtcgtcagttctacgtgtgtggcaaacca
agagagaagcagtgttcatacttccagtgggctgatgaagaacccaagagtggtggtggt
ggtggtggtggtggaggtttcaagggaagctctaacttcagccgaggaggaggaagtgca
ggaggccaggccaagaattggtcctcttcttcattccaaggtggtcgaggtggaagagga
agaggaggaggaggtggaggcaggggtggtggaggtggtggtgggcagggcaagaggaga
aagccaacatgcagtatctgccatgaagaaggccacaccaagagatcctgcccacagaaa
tga
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