Strongylocentrotus purpuratus (purple sea urchin): 577326
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Entry
577326 CDS
T01019
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03015
mRNA surveillance pathway
spu03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
577326
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
577326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
577326
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
577326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
577326
NCBI-ProteinID:
XP_011673791
LinkDB
All DBs
Position
Unknown
AA seq
953 aa
AA seq
DB search
MADGVDIDLYADDVDQEFSQEAEQYNSSSGGVDLYDDVITAPSDGGGGKPQNVSGGGDAS
KARRHSSDQHNSNQPSYSGKRVSLYVGNLTWWTTDMDLKQAVNELGVKDLHEIKFFENRA
NGQSKGFAAVHVSSDNSYRLLMHNLGKKEIHGQLPMVTQYNKQNFGQFDQASKKAQDSRE
QRPEGRPNNPGREERFNQHNNNWRGGAQGGQGDGRDNRDNRDNRDNRDNRDFRNRDDRFQ
DRRGGNSFGGPPNNQGPPPPRFQNQGPPQGPPHMNQGPPPMNQGPPPMNQGPPPMNQGPP
PMNQGPPPMNQGPPPMNQGPPMNQGPPMNQGPPMNQGPPPMNQGPPPMNQGPPPMNQGPP
PMNQGPPPPMNQGPPPMNQGPQGPPRQGPHPQGPPPPRGMPPPNQGPPPMQGPPRPGGPP
PRGPPPGMPPPGMQGPPRGPPLPGGPRGPPPPGMRGPPPPNMDKGPPPMGPPGGPPRMQG
PPPPHPGGPPPHHGGPPPPHQGPPQHHGGPPPPHQGPPPRGPPPGPAPRPGGPPPPHMSG
PPLPMPGPGGPPPNRGPPPPMQGPPPPMQGPPPNQNMMQGPPRGPLPPQGVPPPGRPQVS
GPPPNMGPPPNMGPPPMQAPPQNMAPPQMQAPPQNMAPPPQNMQGPPQNMQGPPQNMQGP
PQNMQGPPPNMNRPPLPHNMGGHPPQSMSGPPPNMGAPPLNMGGPPPVAPVPQQHHVQQT
MPQPQQVQAPVSVAPPAPHVNPAFFTGQPQVQQQQPQQAPPQQDRTMYDQSRQQTYTQQE
YRAPSEPDRQPSPAPQLGEAEFEEIMNRNRNVSSSAIARAVNDASSGAFTSAIDTLETAI
SLIKRSKVANDDRCKLLISSLQDCLHGIETKSYGGSSGSSSSRSRKDRGSRERDPENRHR
SRESRSSRHKRERSRSRDREYRERSREREYSDRERGDRHRDRDRDRDREYRRR
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggcgtggacatcgacttgtacgccgacgatgttgatcaggaatttagccag
gaggcagagcagtacaactcaagctcaggcggtgtggacctctatgatgatgtcataaca
gcaccttcagatggcggtggcggtaagcctcaaaatgtgtctgggggtggcgatgcttct
aaagctcgtcgtcattccagtgatcagcataactccaatcagccgtcctactcgggcaag
agagtctccctctatgttggcaatcttacatggtggaccacggacatggacctgaagcag
gccgtcaatgagctgggtgtgaaggacctgcatgaaatcaagttctttgagaatcgagcc
aatggccaatccaaggggtttgcagctgtacatgtgagctcagacaactcatacaggctc
ctcatgcacaacctaggaaagaaagaaattcatggccagcttccaatggtcactcagtac
aataaacagaactttggccagtttgaccaagcttctaagaaagcacaagatagcagagaa
cagcgtccagaaggcagacctaacaacccaggccgagaagaacgcttcaaccaacataac
aacaactggagaggtggcgcccaaggtggacaaggcgacggtagagacaaccgtgataat
cgtgataatcgtgataatcgcgacaatcgcgatttccgcaaccgcgatgaccgtttccaa
gatagacgtggtggaaactcttttggaggccctcctaacaaccagggcccgcctcctcca
agattccagaaccagggcccacctcaaggaccgccccatatgaatcagggaccacctcct
atgaaccagggaccacctcctatgaaccagggaccgcctcccatgaaccagggaccgcct
cccatgaaccaaggaccgcctcccatgaaccaaggaccacctccaatgaaccaaggacct
cccatgaaccaaggacctccaatgaaccaaggacctccgatgaatcagggaccgcctccg
atgaatcagggaccgcctccgatgaatcaaggaccgcctccaatgaatcaaggaccgcct
ccaatgaatcagggaccgcccccacccatgaatcaaggtcctccacctatgaaccagggt
ccacaaggtcccccacggcaaggaccacatcctcaaggtccaccaccaccccgaggtatg
cctccacccaaccaaggtcctcctccaatgcagggaccgccccgcccagggggacctcca
ccgcgcggccctcctccagggatgcctcctccaggtatgcaaggacctccccgtggccca
ccactaccagggggtcctagaggcccccctccaccaggcatgcgtggaccacctcccccc
aacatggataaaggaccccctcctatgggtccaccaggtggacctccacgcatgcagggc
cctcccccaccccacccaggtggcccgcctccacatcatggtggccctcccccaccccat
caaggcccacctcaacatcatggaggtcctccccctccccatcaaggcccgcccccacgt
ggcccccctcctggacccgctcccagaccaggaggacccccaccacctcacatgagtggt
ccacctctccccatgccaggcccaggtggacctcctccaaacagaggcccgcctcctccc
atgcagggaccaccccctccaatgcaaggaccgcctccaaatcaaaacatgatgcagggg
cctccaagaggacctcttcccccgcaaggggtccctcccccaggccggcctcaagtctct
ggtcctcctccaaacatgggcccgccccccaacatgggaccacctcctatgcaggctccg
ccccaaaacatggcacctcctcaaatgcaggctccaccccaaaacatggcacctccccct
caaaacatgcaaggacctcctcaaaacatgcagggacctcctcaaaacatgcagggacct
cctcaaaacatgcaaggacctcctcctaatatgaacaggcctcctctcccacataacatg
ggcggccatccaccccaaagcatgagtggccctccacccaatatgggggccccgcctcta
aatatgggaggaccgcctcctgtggcacctgtcccccagcagcatcatgtacagcagaca
atgccccagcctcaacaggtgcaagctcctgtttctgtagcgcccccagcgccccatgta
aaccctgccttcttcactggtcagccgcaggtacaacagcagcaaccccagcaagcacct
ccccagcaagacagaacgatgtatgaccagtcaaggcagcagacctatacacagcaagaa
tacagagctccatcagaaccagacaggcaaccctctccggcccctcagttgggcgaggcc
gagtttgaagagatcatgaacaggaatcgtaacgtatcgtctagcgccatcgctagggcc
gtcaacgatgcatcatcaggtgccttcaccagtgctatagacacattggagacggccatc
tcactcatcaaaaggtcaaaggttgctaacgatgaccgttgcaagcttcttattagctct
cttcaggattgcctgcatggaatcgagaccaagtcctacggaggatcatcaggttcaagc
agctcgcggtcacgcaaggaccgaggatcgcgagagcgtgaccctgagaaccgtcacagg
tcacgtgaatctcgcagctccaggcataaacgtgagagatctcgcagtcgggacagagaa
taccgggagaggagcagagagagagagtacagcgacagggagcgtggggatcgtcatcgg
gaccgggatcgggaccgtgatagggagtaccgaagacgttag
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