Strongylocentrotus purpuratus (purple sea urchin): 579362
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Entry
579362 CDS
T01019
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
579362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spu03019
]
579362
Enzymes [BR:
spu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
579362
Messenger RNA biogenesis [BR:
spu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
579362
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
HA2_N
nSTAND3
AAA_22
AAA_19
ATPase
AAA_14
Dynamin_N
NB-ARC
Nnf1
Motif
Other DBs
NCBI-GeneID:
579362
NCBI-ProteinID:
XP_030852298
LinkDB
All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MSDRGEGGPGGYGYYGRGRGRGRGGGGRGGRGGGRGGGRGGGGGRGGGRGGGGRGGGGRG
GPPPGLTGRDIGMWYAQRGRGKKKDQELRERGSVNLNDEQERQIKRMLHEVEGLRENQPQ
SNAQQQPKVMRPAEVVCQNFYGHQLMQDPNLDIHLQEELTKKENSEQYQKMQTFRRKLPS
FAMKDELLSLIRSNQVVVISGETGCGKTTQVPQFILDDYISRGQGSTCRVVCTQPRRISA
ITVAERVAAERAERCGHENSVGYQIRLENTFPRAQGCILYCTTGILLKWLEGDKLLNSVS
HVVLDEVHERDLLSDFLLIILKDLLPKRRDLKLILMSATLRAELFSDYFGQAPTVNIPGF
TFGVTEFYLEDILELTRYQPPAPKNTRQEPVWVKYKKGKRNREEEMEKEQQDRKKFNEYL
QAMRETYSEQVVDTLSSMDHNVLDLDLTAELLRYISLQKPEGAILVFLPGWDQISKLHDK
LTSQTLFSEERFIIIPLHSMMPTINQRQVFEHPPPGVRKIIIATNIAETSITIDDVVYVV
NLGRVKETNFDVANNIRTMKAEWVSKASAHQRRGRAGRVQDGECFHVYSQLRASELVEYQ
LPEIKRTPLEELCLNIKTLKLGSVHPFISKAMETPDIRAIELAISSLKQMRAFDDNEDLT
ALGYHLSRLPVEPRIGKMMLFGAMFCCLDPILTIAASLSWKDPFYIPLGKEKLADERRRV
LSNNTRSDHLMLANAMSGWEDAKEHRGEGSYCWQNFMSSNILSMLSKMKGQFCDVLHRLR
FVSDRSPKHIDANRNSENEQLVKAVLCAGLYPKVAHIDKVPFNRKTGQNRPPRLSTPEDG
RVQIHLKSVNANETTFSSKWLLYHLKLKSTSVFLHDTTMVEPYPLIFCGGKISWDDDQGH
ETVFVDDHIKFHCSQETAHLVIKLREELDRVMEQKITNPGPTNWSPASHEGRVMRAIIDI
LVMQSRDTYDNDDDQGFVHRHGGNDDDDDDEAGGAGGGRQYGRSGNRYTNDDRPGSSHWR
PDSHRRRNQGNPHQGFWTQN
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaggggaaggaggaccaggcgggtatggctattatggaagaggtagaggt
agagggcgtggtggaggtggaagaggaggaagaggaggaggaagaggaggaggaagggga
ggaggaggtggaagaggaggaggaagaggaggaggtggaagaggaggaggaggaagagga
gggccaccaccaggtctgacaggcagagacattgggatgtggtatgcacagcgaggtcgg
ggcaagaagaaagatcaagagcttagagagagaggaagtgtgaacctgaatgatgaacag
gagaggcagatcaaacgcatgctccatgaggtagagggtctccgagaaaatcaacctcaa
tcaaatgctcagcagcaacctaaagtcatgcgaccagcagaggttgtatgtcagaacttc
tatggacatcaactgatgcaggatccaaatctagacattcatctccaagaagaactgacc
aagaaagagaacagcgagcagtatcaaaagatgcagacttttagacgaaaacttccctca
tttgccatgaaagatgagctgctgtctcttatcagaagcaaccaggttgtcgtgatcagc
ggagagacaggatgcggtaagactactcaggttcctcagttcatcctggatgattacatc
agcagaggtcaagggtcaacgtgtcgtgtcgtctgcacgcaaccaagaaggataagtgca
attacagttgcagagagagttgcagcagagagagctgagaggtgtggtcatgagaacagc
gtgggttatcagattcgattggagaatactttcccacgtgctcaggggtgtatcctctac
tgtaccacaggaatactcctcaagtggctcgagggggacaaattactgaacagtgtcagc
catgttgtattagatgaggtccacgagagagatctcctgtctgactttcttctcatcatc
cttaaagatctcctcccaaagaggagagacctgaagctgatattgatgagtgccactctc
agagcagaactgttctcagactacttcggtcaagctccaacggtcaacattccaggattc
acattcggtgtcactgagttttacctagaagatattctagagctgacaaggtatcaacct
ccagcaccaaaaaacacacgccaagaaccagtttgggtgaagtacaagaaaggaaagaga
aatagggaggaagagatggagaaggaacagcaggaccgcaagaagtttaatgaatacctt
caagcgatgagggagacgtattcagagcaagtggtggataccctgtcatcaatggatcac
aatgtcttagatctagatctcacagctgaactactgcgctacatctcactgcaaaaaccg
gagggtgccatccttgtctttctaccggggtgggatcagatcagtaagctacatgacaaa
ctcacctcccagacgctcttctcagaagaaaggttcatcatcattcctctacactctatg
atgcctaccatcaaccagagacaggtatttgaacatccacctcccggagtacggaagatc
atcatagcaaccaacattgcagagactagcatcaccatagatgatgtggtctatgtggtc
aacctgggacgagtcaaagaaaccaactttgatgtggccaacaacattcggacgatgaag
gctgaatgggtcagcaaggcgtcggctcatcagaggagagggcgagctgggagggtgcag
gatggagaatgcttccatgtgtacagccaactaagggcatctgaattggtggaataccaa
ctcccagaaatcaaaagaactcctcttgaagaactctgtctcaacataaagaccctgaag
ctaggcagtgtgcatcccttcatcagcaaagctatggaaacccccgacatcagggcaatt
gagctagccatcagcagtctcaaacaaatgagagcctttgatgataacgaggacctgaca
gctttgggataccatctatctcgtcttccggtggagcctcgtattggtaagatgatgctg
tttggtgccatgttctgctgtctggatcctatactcaccatagcagcatctctcagctgg
aaggatccattctacattcctctgggtaaggagaagctcgctgatgagaggcgtagggtg
ctgtccaacaacacccgcagtgatcacctgatgttagctaatgctatgagtggctgggag
gatgctaaggaacacagaggagagggatcctactgctggcaaaacttcatgtcttcaaac
atcctcagtatgctgagtaagatgaagggtcaattctgtgacgtcctgcatcgtttgagg
tttgtctccgacagatcacccaaacacatcgatgcaaatagaaattcagagaatgagcag
cttgtgaaggcagtactgtgtgccggtctctacccaaaggtagcgcacatagataaggtg
cctttcaatcgaaagacgggacagaatagacctccaaggctaagcaccccagaggatggt
cgagttcaaatccaccttaagtctgtcaatgcaaatgaaacaaccttcagcagtaaatgg
ttgctctaccatctcaaactcaagtcaacaagtgtctttctccatgacactaccatggtt
gagccttatcccttgatcttctgcggcggtaagatctcctgggacgatgaccagggccat
gaaacggtctttgtggatgaccacatcaagtttcactgctctcaggagacggcacatctc
gtcattaagttacgtgaggagctagacagagtcatggaacagaagatcaccaacccagga
cccaccaactggagtccggcaagccatgaaggcagagtcatgagggccatcatcgacatc
cttgtcatgcagtccagagatacatacgataatgatgatgatcagggattcgtacacagg
cacggtggtaatgatgatgatgatgatgatgaagctggtggggctggtggtggccgacaa
tatggacggtccggtaataggtacactaatgatgacaggcctggaagcagtcattggaga
ccagactcgcatcgtaggagaaaccaaggaaatccccaccaaggtttctggactcagaat
taa
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