Strongylocentrotus purpuratus (purple sea urchin): 581506
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Entry
581506 CDS
T01019
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03430
Mismatch repair
spu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
581506
03460 Fanconi anemia pathway
581506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spu03400
]
581506
DNA repair and recombination proteins [BR:
spu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
581506
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
Motif
Other DBs
NCBI-GeneID:
581506
NCBI-ProteinID:
XP_786592
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MAVAGKVKAIDRRSVHQICSGQVVLNLATAIKELVENSLDAGATIIEIKLKDYGGESLEV
SDNASGVQECNFSGLTLKHHTSKLHDFSDLSTVDTFGFRGEALSSLCALSDLTIVTCHRS
ASVGTKLVYDHDGKILKQVPCPRQQGTTVTLQNLFSTLPVRHKEFQRNLKKEFTKMVQVL
QAYCIIASGVKLTCTNQTDKGKKSLVVSTNGTSTMRENVANVFGSKQIQSLLEFDQCRPT
PEMCEEYGIKPERLEKIPFSVSGFVSKCDHGQGRSAADRQYYFINRRPCDFPKVSKLINE
VFHMYNRHQFPFVVMDISLAKDAVDVNVTPDKRKVLVQEEKTLLAILKASLKAMFEPRSS
CYDVNQKPLSAVTPSSLALSNMFSRSPSSSQGSSQTSTGSPSTGQVSSPASSLGCSQFSS
SQGSPCFRPSSQREGKRAGTLNLGNLKRSFAHASHQDDGEEERQPKQPKLDAFFQSSQEL
TNRSDSVDRIPSTFDERESSETFSDTVPSCTISFENCRTEPEGIANGKSPIISLQHSIPP
SRVETEEVGISPLRNKLHDSLCTDEGSKTGESHKVEDCLSPGVALLRSDGESGFCESSTG
GSSGIRSSEESQTNSSQEPSQETQEHRLHCTSTDVGSAIEDGETHRILIHRMDDSTPSSS
DSGQRREVTVPLSLAGLRRAREQRETQEREEGIAGRTFRAKIAPSDNASAEEELSREISK
DMFSKMEILGQFNLGFIIAKLGQDLFIIDQHATDEKYNFETLQKHTVLQGQRLIQPLPLE
LTAVNESILMDDVEIFKKNGFDFIIDEDGRPTERVKLVSQPFSKNWTFGKDDIDELIFML
SDAPGVHCRPTKVRQMFASRSCRKSIMIGTALNKAEMKKLVCHMGELEQPWNCPHGRPTM
RHLFNLNMMPD
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctgggaaagtgaaggcgattgaccggcggtcagtccatcagatctgctcc
ggccaagttgtcctgaatcttgccacagccatcaaagaacttgttgagaatagtttggat
gctggagctacaatcattgaaatcaaattgaaggactatggcggtgagagtctggaggta
tctgacaatgcttcaggagtacaggaatgcaacttctcaggactcactttgaagcaccac
acatccaaacttcatgatttctcagacctgagcactgtagatacgtttggttttagagga
gaggctctcagctcactctgtgcactgagtgacctgactatagtgacatgtcaccggtct
gcttcagtgggaaccaagctggtgtatgatcatgatggcaagatcctcaaacaagtacct
tgccctagacagcaaggtacaacagttacacttcagaatctcttctccacccttccagtc
agacacaaggaattccagagaaacttgaaaaaggagttcaccaagatggttcaagtttta
caagcgtactgcatcattgcgtcaggagtcaagttaacatgcacaaaccaaacagacaaa
gggaagaaatctttggttgtatctaccaatgggacctcaacgatgagagaaaacgttgct
aatgtctttggatccaagcagatacagagtctcttggagtttgaccagtgcaggccaacc
cccgaaatgtgcgaagagtatggcatcaaacctgaacgactcgagaagatccctttcagt
gtatctggttttgtgtctaagtgtgatcatggtcagggccgcagtgcagcagatagacag
tactacttcatcaataggagaccatgtgactttcctaaggttagcaagctgatcaatgaa
gtcttccacatgtacaacagacatcagttcccatttgttgttatggatatctcacttgct
aaagatgcggtggatgtgaacgtcacacccgataagaggaaagtactggtgcaggaggag
aaaacacttctagctatcctcaaggcatctctgaaagccatgttcgagccacggtcctcc
tgttacgatgtcaaccaaaagcccctgtcagcggtcactccgtccagtttggccttgtcc
aatatgttcagccgcagtccaagcagcagccagggcagtagtcaaactagcaccggtagt
ccaagcactggtcaagtcagtagtccggccagtagtctgggctgtagccagttcagtagc
agtcaaggcagtccatgtttcaggccgagcagtcagagggagggcaaaagagctgggact
ctcaacttgggcaacctcaaaagatcatttgcccatgcaagtcaccaggacgatggggag
gaagagaggcaaccaaaacagcccaaactggatgccttctttcaaagttcccaagaattg
accaataggtcagattctgtggacagaattccttcgacctttgatgagagggagtcttca
gagactttcagtgacactgtaccttcctgtacaatttcatttgaaaactgcagaactgaa
cctgaaggtatcgcaaatggcaaaagtcctatcatttctctccaacatagtatacctccc
tcacgtgttgaaactgaggaagtaggaatctcgccattaagaaacaaattacatgactcc
ttatgcactgatgaagggagcaagactggggaatcgcataaagtggaggactgtttgtct
ccaggagtggccctgttaaggtcagacggtgagagcggtttctgtgaatcttcaaccggt
ggcagcagtgggataaggtctagtgaggagagtcagaccaacagcagtcaggaacccagt
caagagacacaggaacacagattgcattgtacctctacagacgtgggaagtgcgatagag
gatggagagacccatagaatactcattcataggatggatgacagcactccttcatcatct
gattccggtcagagaagagaggtcactgttcccttgtccttagctggtctcagaagggct
cgagaacaaagagagacgcaagaaagagaggaaggcattgctggtcggacgttccgagcc
aagattgctccttcggacaatgcctcggctgaagaggagcttagtagagaaatcagcaag
gatatgttttccaaaatggagattcttggtcagttcaatcttggattcatcattgccaag
ctaggacaagatctattcatcattgatcagcatgccactgatgaaaagtacaattttgag
actttgcagaaacacacagtactacaaggacaaagacttattcaaccattacctttagag
ctgactgctgtgaatgagtccatcttgatggatgatgtggagatcttcaagaagaatgga
tttgatttcatcattgatgaggatggtcgtcctacggagagggtcaagctagtgtcgcag
ccctttagtaagaactggacgttcggcaaggatgatatcgatgaactcatattcatgctc
agtgatgcacctggtgttcactgcagacccaccaaggtacgtcagatgtttgcttccagg
tcgtgtcggaagtccatcatgattggcaccgccctcaacaaagcagagatgaagaagctg
gtttgtcacatgggtgaattggaacagccttggaactgcccccatggtcgccctaccatg
cgtcatctcttcaacctcaacatgatgccagattga
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