Strongylocentrotus purpuratus (purple sea urchin): 589355
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Entry
589355 CDS
T01019
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
spu
Strongylocentrotus purpuratus (purple sea urchin)
Pathway
spu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
spu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
589355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spu03021
]
589355
03036 Chromosome and associated proteins [BR:
spu03036
]
589355
Transcription machinery [BR:
spu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
589355
Chromosome and associated proteins [BR:
spu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
589355
Chromatin remodeling factors
BAF complex
589355
PBAF complex
589355
GBAF(ncBAF) complex
589355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
BRK
HSA
ResIII
QLQ
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
589355
NCBI-ProteinID:
XP_030852846
LinkDB
All DBs
Position
Unknown
AA seq
1969 aa
AA seq
DB search
MADDPMPAPNQIADNNMSSDMNHPGTGPSGPPGSGPVQGYEQGGTGPRMQSQGGPMPSPM
QGGPSNSPMMTPSPGPGMSGPSPSGMQQGPGPMGDSNMMPPSMSPMQGGQGHMMPPQGPP
SMGGHAPSSGPGPMPPYQSQMMNQGPRPGHNPMAPPNQGYMGGQYGGQHGGQHGGQGMNT
GGSVAGHGMMGPGQQYQGPPHQVPPHQGPPHQGQMHQGGPHQGPMHQGPPHQVPPHQGPP
HQGSPHPGPPHQGGPHPGPPHQGSSHQGPPHQGPPHQGPPHQSGPHQVPSSHQVPPHQGG
PHQGGPPHQGGPPHQGGPPMQAQQGQQQHQVPQHPTSGHQGPPHQGPTSHSGPGPHQGGQ
PVPSGPHTGPPHQGPKPMPSQGSMPGHGPMQNPLEHGQRGPSPVQNFPMQSSGPGQGPHG
SQSQQMNQNYNPNNYTMLQRALETMQEKGLQNDPRYPQIVAMANKAKQYAHMQQQSMPPS
GNMGGPPGRNGGGYMEGSGNMPPSGYQQHSGPQRARPSPFTPVQLQQLKAQIMGYKFLSR
NQPLSDHLRMAIQGQYQQQMRGGQGPMPGQPGQMHMSSHNQPWGNQQQPGNQQHRKGPSN
MSDMLSSPRMPQQMQQQQQQHSQQGAPGAFPGQQQPGGGSAQTQQPLPPPNSNITTVGML
LAKQNRQVPVAKPKGLDPVEILQERENRVAARISYRVTELQTLPGNLPEDLRVKATIELR
ALRLLNFQKQLRQDVVACMRKDTTLESALNIKAYKRSKKQTLREARITERLERQQKMELE
RKRRQKHQEYLSCVIAHAKEFREFHRGIQSKISKCNKAVMMYHANTEREQKKESERIEKE
RMRRLMAEDEEGYRKLIDEKKDKRLAYLLTQTDQYIESLTQLVRQHQDVMKKMKRRKKKK
EPTTSEALKEGLVDESSQSSDMPVTVMNQETGQVLSGEAAPRSSQLEAWLEMNPGYAVAP
RDEGSDDEESGSEDEEDEGEEDEEKEEVMVPVPVETIRPDLYGKTAKDIIQESSVGDDEY
KSIEQAGGAGYYNMAHSINEIVTTQPEMLVNGTLKEYQVKGLQWLVSLYNNNLNGILADE
MGLGKTIQTIALVCHLIEKKKVMGPFLVIVPLSTLSNWVLEFDKWGPTVHKIVYKGSPQT
RRTLALTLRSTKFSVLLTTYEYVMKDKSFLSKLRWKHMIVDEGHRMKNHHCKLTQILNTH
YSSHHRLLLTGTPLQNKLPELWALMNFLLPSIFKSCSTFEQWFNAPFAATGEKVELNEEE
TILIIRRLHKVLRPFLLRRLKREVESQLPEKVEYVIKCDMSALQRLLYRHMQTKGIMLTD
GSEKDKKGRGGTKALTNTIMQLRKICNHPFMFRHIEESFSEHLGVTGGIISGPDLYRVGG
KFELLDRILPKLKALGHRILLFCQMTTLMTILEDFFVYRGFKYLRLDGTTKADDRGILLQ
TFNEANCPYFIFMLSTRAGGLGLNLQTADTVILFDSDWNPHQDLQAQDRAHRIGQVNEVR
VLRLMTVQSVEEKILAAARWKMNMDSKIIQAGMFDQKSTNSERRAYLRALLERDADQDDE
ENEVPDDETVNQMIARSEEEFEIYQRMDIERRRNEARDPNRKPRLMEVNELPSWLVKDEE
DVERLTFEEEEEKLFGRGSRQRKDVDYSDTLTEKEFLRAIQDGNLDEIEESKKEKKRRYK
RKRPIDDDDEQEGEVEREQEREVEREQERDNPEVEKPKKRRGRPPAEKPSPNPPHLTKLM
KKLVEVMSKYKDNTGRPLAHPFMQLPPKRILPDYYELITKPMDLKKIKDRIRQHKYRCLD
DLERDTVLMFQNAQIYNLEGSQIYDDSIVLHSVFTTARKCLEQTGRLPPQLGGKSESESE
SDTDDNEEPEAKKPKTTKGGKGKGEDKGKKPAKRGRPPRKAVVSDDDSDDEVDDDDDDDD
GKSDDNGKSDQDSQQQSDDADSDTDADDNTPDTSRASSRGASPAPGKKR
NT seq
5910 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgacccaatgcctgcaccaaaccagatagcagacaacaacatgagttcagac
atgaatcacccaggaacaggacccagtggtccaccaggatcaggaccagtgcagggctac
gagcaaggaggaacaggccctagaatgcaatcacaaggaggacctatgccaagccctatg
cagggaggaccaagcaatagcccaatgatgacaccaagtccaggccctggaatgtccggt
cctagccccagtggcatgcagcaagggccaggcccaatgggagatagtaatatgatgcca
ccatcgatgagccccatgcaggggggtcaggggcacatgatgccccctcagggaccacca
tccatgggaggtcacgcaccttcgtctggtccaggacctatgccaccataccagtcacag
atgatgaatcaaggtcctcgccctggtcacaacccaatggcccctcctaaccagggctat
atgggaggtcagtacggaggtcaacatggaggtcaacatggtggacagggaatgaataca
ggtgggtctgtggctggacatggtatgatgggtcctgggcagcagtaccaggggcctcca
caccaggtaccaccacaccagggacctcctcaccaaggccaaatgcatcaaggaggaccc
catcaaggacctatgcatcaaggaccaccccaccaggtgccaccccatcagggcccccca
catcaaggttcccctcacccaggcccaccacatcaaggggggcctcacccaggcccaccc
catcagggttcatcacatcagggcccgccgcaccagggcccgccgcaccagggtcctcct
catcaaagtggacctcatcaggtacctagctctcatcaggtaccccctcatcaaggtggc
ccgcaccagggtggaccaccccatcaaggaggaccaccccatcaaggaggtccacctatg
caggctcaacagggccagcaacagcaccaggtacctcaacatccaaccagtggtcaccaa
ggcccacctcatcaggggccaacatcacactctggtcctggacctcaccagggaggacag
ccagttccttctggtccacacactggaccaccacaccagggtcccaagcctatgccaagc
caagggagcatgcctggtcatgggcctatgcagaacccgcttgaacatggccaacgaggt
ccaagccctgttcagaacttccctatgcagagctctggaccaggacaaggcccacatgga
tcacagtctcaacagatgaaccagaattacaaccctaacaactacaccatgctacaaaga
gctttggagacgatgcaagagaaggggttacagaacgaccctcgctacccacagattgtt
gctatggctaacaaagctaagcagtacgctcacatgcagcagcagtccatgcccccatcg
ggcaatatgggcggaccaccaggcagaaatggaggaggttatatggagggctcgggtaac
atgcccccatcaggctaccagcaacacagcggaccccagcgagccaggcctagccccttc
acaccggtccagctccagcagctaaaggcacagatcatgggctacaagttcctctcacgt
aaccaacctctgtctgatcatctgcgcatggccatccaaggacagtaccaacagcagatg
agaggtggccaaggtcctatgcctggtcagccaggtcagatgcacatgtcatctcacaac
caaccctggggcaaccaacagcaaccaggcaatcagcaacaccgcaagggcccgtctaac
atgagtgacatgttatccagccccaggatgcctcaacagatgcagcaacagcagcagcag
cattcgcagcagggtgctccaggagcgttccctgggcagcagcagccaggaggaggcagc
gctcagacacagcagcccctccctcctcctaactcaaacatcaccactgtagggatgctg
ctggctaagcagaacagacaggtgcctgtggccaaacccaagggattagaccctgtggag
atccttcaggaaagagagaacagagttgctgcccgcatctcataccgcgtcacggagctg
caaacccttcccggcaacctccccgaggacctgcgtgtgaaggccaccatagagctccga
gcccttcgtctgctcaacttccagaagcagcttcgccaggatgtagtggcctgcatgcgt
aaggacaccactttagagtcggctctaaacatcaaggcttacaagcgctctaagaaacag
accctgagggaagcccgcatcacagagaggctggagagacagcagaagatggagctggaa
cgcaagcgcagacagaaacaccaggaatatttgagctgtgttatcgcgcatgctaaggag
ttccgtgagttccatcgtggcatacaatccaagatctccaagtgtaacaaggctgtcatg
atgtaccatgccaacacggagcgagaacagaagaaggagagcgagaggattgagaaagag
cgtatgcgccgcctcatggctgaagatgaagaaggttacagaaagcttattgacgagaag
aaagacaagcgtctagcctacctgctgacccagactgaccagtacatcgagagcttgacc
cagctggtcagacagcatcaggacgtcatgaagaagatgaagagaaggaagaagaagaag
gaaccaactaccagtgaagccctcaaagaagggctggttgatgaaagcagtcaatcgagt
gacatgccagtgactgtgatgaaccaagagactggtcaggtgctatcgggtgaggctgcc
cctcgatccagtcagctagaggcttggcttgagatgaatcctggctatgctgtagctcct
agagatgaaggttccgatgatgaggagagtggatctgaagatgaagaggacgaaggagaa
gaagatgaggagaaagaagaggtgatggtaccagttcctgttgaaactattagacctgac
ctttacggcaaaacagccaaggatattatacaggagtcttcagtgggcgatgacgagtac
aagtctatagaacaggctggtggagctggctactacaacatggcccattccatcaatgag
atagtgaccacacaacctgagatgcttgtcaatggtacactcaaagaataccaggtgaaa
ggtcttcagtggctggtatctctgtataacaacaatctgaatggaatcctggccgatgag
atgggtttgggtaagaccatccagaccattgctcttgtatgtcatctgattgagaagaag
aaagtcatggggccattcctcgtcattgtaccactctcaaccttgtccaattgggtgctt
gagtttgataagtggggaccgacggtccacaagatagtctacaagggctctcctcaaacc
cgacgtactcttgccctcaccctgcgatcaaccaagttcagcgtactactcaccacctat
gagtacgtcatgaaggataaaagcttcctctccaagctccgttggaagcatatgatcgtt
gatgaaggacatcgtatgaagaaccatcattgtaagctgactcagattctcaacactcac
tacagctctcatcatagactcttactcactggtactccattacagaacaaactgcccgag
ttgtgggccctgatgaacttcttgctaccaagcatcttcaagtcctgcagtacctttgag
cagtggttcaatgctccctttgcagctaccggagaaaaggttgagctgaatgaggaagag
accatcctgatcatccgtcgtcttcacaaggttcttaggccgttccttctgcgtcgtctc
aagagggaagtggaatcacaactcccagagaaggttgagtatgtgatcaagtgtgacatg
tcagctctgcagaggttactgtacagacacatgcagactaagggaatcatgctgactgat
ggctcagagaaagacaagaagggacgtggtggtaccaaggcgctgacaaacaccatcatg
cagctcaggaagatatgtaaccatccattcatgttcagacatatcgaggaatctttctct
gagcatcttggagtgaccggtggcatcatctctggccctgacctgtacagagtgggcggt
aagtttgaactgcttgaccgcatcctgcccaagctgaaggctcttggtcatcgtatcttg
ctcttctgtcagatgaccactctgatgaccatcctagaagacttctttgtctacagaggt
ttcaagtatctgcgtttggatggtacgaccaaggctgatgatcgtggcatacttcttcag
accttcaacgaggctaactgcccgtacttcatcttcatgttgagtaccagggcaggtggt
ttggggctcaatcttcagactgctgatactgtcatcttgtttgacagtgactggaatcct
catcaggatctccaagcccaggaccgtgcacatcgtatcggtcaagtgaacgaggtccgt
gtcctgcgtctgatgaccgtccagagcgtggaggagaagatcttggccgcagccaggtgg
aagatgaacatggacagtaagatcatccaggctggtatgtttgaccagaagtctaccaac
tccgagagaagggcgtacctacgagctctgctggagagggatgctgatcaggacgatgag
gagaatgaagtccctgatgatgagacagtcaatcagatgatcgcccgatccgaagaggaa
tttgagatctaccagcggatggacatcgagcgtcggcgcaacgaggcccgtgacccgaac
cgcaagccacgtctgatggaggtgaatgagcttcctagctggctggtcaaggatgaggag
gatgtggagagactgacctttgaggaggaggaagagaagctgtttggacggggctctaga
cagaggaaggatgtagactacagtgatacactcacagagaaagaattccttcgggcaatc
caagatggcaacttggatgagattgaggagagcaagaaggagaagaagcgtcgctacaag
cgcaagcgtcccatcgacgacgatgacgagcaagagggagaggtggagagagagcaggag
agagaggtggagagggaacaagagagggacaatcctgaggttgagaaacccaagaaacgt
agagggcgccctccagcagagaagccgtcccctaatcctccgcatctcaccaaactcatg
aagaaactggtagaggtcatgtccaagtacaaagacaatactggtcgtcctctggcccat
ccattcatgcagctccctcccaagcgaatcctacctgattactacgagctgatcaccaag
cccatggatctcaagaagatcaaggataggatcaggcagcataagtatcgctgtctggat
gatctggagagggacaccgtactcatgttccagaatgctcagatctataacctggaggga
tcacagatctacgatgattccatagtgctacactcagtcttcaccacggctcgcaaatgt
ctagaacagactggtagactgcctcctcagctgggcggcaagtcagagagtgagagtgaa
agtgacaccgatgacaatgaagaacctgaagcaaagaaacccaagaccactaaaggtggc
aagggcaaaggagaagacaagggcaagaaacctgccaagagaggtcgtccaccacgcaaa
gccgtcgtcagtgatgatgatagtgacgatgaggtagacgacgatgatgatgacgatgat
ggcaagtctgatgataatggcaagtctgatcaggatagccagcaacaaagtgatgatgcc
gattcagacactgatgctgatgataacacgccagatacatcccgggcttcgtctagaggt
gcgtcccccgctccaggcaagaaacgataa
DBGET
integrated database retrieval system
