Sphingobium sp. YG1: YGS_C1P1714
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Entry
YGS_C1P1714 CDS
T05858
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg00470
D-Amino acid metabolism
spyg00550
Peptidoglycan biosynthesis
spyg01100
Metabolic pathways
spyg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YGS_C1P1714
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YGS_C1P1714
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YGS_C1P1714
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
YGS_C1P1714
Enzymes [BR:
spyg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
YGS_C1P1714
Peptidoglycan biosynthesis and degradation proteins [BR:
spyg01011
]
Precursor biosynthesis
Amino acid ligase
YGS_C1P1714
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
BBD00459
UniProt:
A0A2Z6AEN2
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All DBs
Position
1:complement(1840737..1841687)
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AA seq
316 aa
AA seq
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MSRGPWHVAVLMGGWSAERPVSLSSGEGVAKALESRGHKVTRIDMDRNVAARLAETKADV
IFNALHGVPGENGTVQGMMDLMGLTYTHSGLATSVIAIDKQLTKQALVPHGIPMPGGHIV
QSESLFAADPLPRPYVLKPVNEGSSVGVAIVTAEGNYGNPIGRDSVGPWQDFPELLAEPY
IRGRELTTAVLGDEALLVTELRPKSGFYDFDAKYTDGMTDHICPADLPPEITEACKAIAL
RAHQLLGCKGASRADFRWDDTQGIEGLFLLEVNTQPGMTPLSLVPEQAAKLGIDYATLVE
TIVAEALDRAGGHGDG
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtggtccctggcatgtcgccgtcctcatgggcggctggtcggcggagcgcccc
gtgtccctgtcgtcgggcgagggcgtcgccaaggcgctggaatcgcgcggccataaggtc
acgcgcatcgatatggaccgcaacgtcgccgcgcgccttgccgaaaccaaggccgacgtg
atcttcaatgcgctccacggcgtccccggtgaaaacggcaccgtgcagggcatgatggac
ctgatgggcctcacctacacccatagcggcctggccacatcggtcatcgcgatcgacaag
cagctgaccaagcaggcgctggtgccgcatggcattcccatgcccggcggccatatcgtg
cagagcgaaagcctcttcgccgccgatccgctgccacgcccctatgtgctgaaacccgtc
aacgaaggcagctcggtcggcgtcgccatcgtcacggcggagggcaattatggcaaccct
atcggccgcgacagtgtcggcccctggcaggacttccccgaactgctggccgaaccctat
attcgcggccgcgaactgacgaccgccgtgctgggcgacgaagccttgctcgtcaccgaa
ctgcgccccaagagcggcttctacgatttcgacgccaaatataccgacgggatgacggac
catatctgtcccgccgacctgccgcccgaaattacggaagcgtgcaaggcgatcgccctg
cgcgcccatcagcttttgggctgcaagggtgcttcgcgcgccgatttccgctgggacgat
acgcaggggatcgaggggctcttcctgctggaggtcaatacccagccgggcatgacgccc
ttgagcctcgtccccgaacaggcggcgaagctgggcattgactatgccacgctggtagag
actattgtggcagaggcgctggaccgcgccgggggacatggcgatggctga
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