Sphingobium sp. YG1: YGS_C1P1866
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Entry
YGS_C1P1866 CDS
T05858
Name
(GenBank) molecular chaperone DnaK
KO
K04043
molecular chaperone DnaK
Organism
spyg
Sphingobium sp. YG1
Pathway
spyg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spyg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YGS_C1P1866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spyg03019
]
YGS_C1P1866
03110 Chaperones and folding catalysts [BR:
spyg03110
]
YGS_C1P1866
03029 Mitochondrial biogenesis [BR:
spyg03029
]
YGS_C1P1866
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spyg04147
]
YGS_C1P1866
Messenger RNA biogenesis [BR:
spyg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
YGS_C1P1866
Chaperones and folding catalysts [BR:
spyg03110
]
Heat shock proteins
HSP70 / DNAK
YGS_C1P1866
Mitochondrial biogenesis [BR:
spyg03029
]
Mitochondrial protein import machinery
Matrix
MMC/PAM proteins
YGS_C1P1866
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Proteins involved in Fe-S cluster biogenesis
YGS_C1P1866
Exosome [BR:
spyg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YGS_C1P1866
Exosomal proteins of breast cancer cells
YGS_C1P1866
Exosomal proteins of colorectal cancer cells
YGS_C1P1866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FtsA
ParM_N
Motif
Other DBs
NCBI-ProteinID:
BBD00611
UniProt:
A0A2Z6AF65
LinkDB
All DBs
Position
1:complement(2012224..2014125)
Genome browser
AA seq
633 aa
AA seq
DB search
MAKVIGIDLGTTNSCIAVMDGGKPKVIENAEGARTTPSIVAFAKDGERLIGQPAKRQAVT
NPDNTIFAVKRLIGRRFDDPLTKKDMELVPYDIAKGPNGDAWVKAGGEEYSPSQISAFTL
QKMKETAESYLGETVTQAVITVPAYFNDAQRQATKDAGQIAGLEVLRIINEPTAAALAYG
LDKQDGKTIAVYDLGGGTFDISILEIGDGVFEVKSTNGDTFLGGEDFDAKLVQYLAEDFK
KAESIDLTKDKLALQRLKEAAEKAKIELSSAQTTEVNLPFITADQNGPKHLVKTITRADL
ERLVADLIKRTMDPVKKAMADAGVSASEISEVVLVGGMTRMPKVREAVKEFFGKEPHTGV
NPDEVVAMGAAIQAGVLQGDVKDVLLLDVTPLSLGIETLGGVFTRMIDRNTTIPAKKSQV
YSTADDNQQAVTIRVFQGEREMAADNKILGQFDLLGIPPAPRGVPQIEVTFDIDANGLVN
VSAKDKGTGKEQQIRIQASGGLSDSDIDQMVKDAERFAEDDKKRRESAEAKNNAESLVHT
TEAQLVEHGDKVDASLKGEIEAAIAETKTAIEGGDAEAMKTKAQELATVAMKLGQAIYEK
EQANAAAPGADAPKADDDVVDAEFSEVDDNNKA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagtaatcgggatcgatctgggtaccaccaacagctgtatcgctgtcatggat
ggcggcaagcccaaggtcatcgaaaatgcggaaggggcacggaccacgccctcgatcgtc
gccttcgccaaggatggcgagcgtctgatcggtcagccggccaagcgtcaggcggtcacc
aatccggacaacacgattttcgcggtgaagcgccttatcggccgccgcttcgacgatccg
ttgaccaagaaggacatggaactcgttccttacgacatcgcgaagggtccgaacggcgac
gcgtgggtcaaggctggcggcgaggaatatagcccgtcgcagatcagcgccttcaccctt
cagaagatgaaggaaacggcggagtcgtacctcggggaaaccgtgacgcaggcggtcatc
accgtgcccgcctacttcaacgacgctcagcgtcaggcgaccaaggacgccggccagatc
gctggtctggaagtgctgcgcatcatcaacgagccgaccgcggctgccctggcctatggc
ctcgacaagcaggacggcaagacgatcgcggtctatgaccttggcggcggcaccttcgac
atttcgatcctcgaaatcggcgacggcgtgttcgaagtgaagtcgaccaacggcgacacc
ttcctgggcggcgaagatttcgacgccaagctggttcagtatctggccgaagacttcaag
aaggccgagagcatcgacctgaccaaggacaagctggccctccagcgtctgaaggaagcg
gctgaaaaggcgaagatcgagctgtcctcggcccagacgaccgaagtcaacctgcccttc
atcaccgccgaccaaaatggtcccaagcatctggtgaagacgatcacgcgcgccgatctg
gagcgtctggtcgccgacctcatcaagcgcacgatggacccggtcaagaaggcgatggcg
gacgcaggcgtgtcggccagcgagatcagcgaagtcgtcctcgtcggtggcatgacccgc
atgcccaaggtgcgcgaagccgtgaaggaattcttcggcaaggaaccgcacaccggcgtg
aacccggacgaagtcgtcgccatgggcgccgccattcaggcaggcgtgttgcagggcgac
gtcaaggacgtgctgctgctggacgtgaccccgctgtcgctgggcatcgagacgctgggt
ggcgtgttcacccgcatgatcgaccgcaacaccaccatccccgccaagaagtcgcaggtc
tattcgaccgccgacgacaatcagcaggcggtgaccatccgcgtgttccagggcgagcgt
gaaatggcggcggacaacaagatcctcggccagttcgacctgctcggcattccgcccgca
ccgcgcggcgtgccgcagatcgaagtcacgttcgacatcgacgccaacggcctggtcaac
gtgtcggccaaggacaagggcaccggcaaggaacagcagatccgcatccaggcgtcgggt
ggcctcagcgactccgacatcgaccagatggtcaaggatgccgaacgctttgccgaagac
gacaagaagcgccgcgaatcggccgaagccaagaataacgccgaaagcctcgttcacacg
accgaagcgcagctggtcgaacatggcgacaaggtcgacgcatcgctgaagggcgagatc
gaagcagcgatcgcggaaaccaagaccgcgatcgaaggcggcgatgctgaagcgatgaag
accaaggcgcaggaactcgccacggtcgccatgaagctgggtcaggcgatctacgagaag
gagcaggccaatgcggcggctccgggtgcagacgcgcccaaggctgacgacgatgtcgtc
gacgccgaattctcggaagtcgacgataacaacaaggcataa
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