Serratia quinivorans: E4343_02930
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Entry
E4343_02930 CDS
T05941
Symbol
dacD
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase DacD
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
squ
Serratia quinivorans
Pathway
squ00550
Peptidoglycan biosynthesis
squ01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
squ00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E4343_02930 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
squ01002
]
E4343_02930 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
E4343_02930 (dacD)
Enzymes [BR:
squ01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E4343_02930 (dacD)
Peptidases and inhibitors [BR:
squ01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
E4343_02930 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
squ01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
E4343_02930 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
QBX65196
LinkDB
All DBs
Position
624097..625266
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AA seq
389 aa
AA seq
DB search
MKRSVLAVITGILLPLAVQAADAPLNFPLNTPPAIDAASYVLMDYTTGQVLAQENADQRR
NPASLTKLMTGLVIDHALDQHKIGLDDVVTVGKDAWAQGNPVFKGSSLMFLKPGDRVTVR
DLSRGIIIDSGNDACVAMADYVAGSQAAFVKLMNEKSAQLGLQNTHFETVHGLDAPGQFT
TAGDLAVISRAIIMSEPAEYHMYSEKSLTWNGITQQNRNGLLWDKNLRVDGLKTGHTESA
GFNIIASATEGDRRLIAVVMGGKSPKGREEQARKLLTWGLRDFVTLHLFSAGQSLGQEKV
WYGDRHEVAVGSRQDQYLSLPKSEADKLKAQYVINTPRLDAPLTQGQSVGEIRISDNGKV
LKTLPLVVLQPVNQGGMFSRLMDYVKLKI
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgaagcgttcagtattggcggtgatcaccggaattttgctgccgttggcggtacaggcg
gcagatgcgccactcaactttccccttaataccccgccggcgatagacgccgcctcttac
gtgctgatggattacaccactggccaggtactggcacaggaaaatgccgatcagaggcgt
aatccggccagcctgaccaaactgatgaccgggttggtgattgatcacgcgctcgatcaa
cacaagattggtctggatgacgtggtaacggtgggtaaagatgcttgggcgcagggcaat
ccggtgttcaaaggctcttcgttgatgttcctgaagcccggtgacagggtcacggttcgc
gatctcagccgcggcattatcattgactccggcaacgacgcctgcgtagccatggcggac
tacgtggcgggcagtcaggccgcattcgtcaaactgatgaatgagaagagcgcccagctc
ggtctgcaaaacacccattttgaaaccgtccacggtctggatgcaccggggcaattcacc
acggcgggcgatctggcggtgatctcccgcgccattattatgagcgaaccggcggaatac
catatgtacagcgagaaatcgctgacctggaacggtatcacccagcagaaccgcaacggg
ctgttgtgggacaaaaacctgcgggtggacggcctgaaaaccggccataccgaatccgcc
ggttttaacattattgcgtctgccaccgaaggcgaccgtcggctgattgccgtagtgatg
ggcggtaaaagtccaaaagggcgcgaagaacaggcgcgtaaactgctgacctgggggctg
cgtgatttcgttaccctacatttgtttagcgctgggcaaagcctggggcaggagaaagtg
tggtacggcgatcgccatgaggttgcggtgggcagccgacaggatcaatatctcagcctg
ccgaaaagcgaggcggataagctgaaggcgcaatatgtgatcaatacgccgcgtcttgat
gctccgctgactcaggggcagtcggtcggcgaaattcgtatcagtgacaatggcaaagta
ctgaaaaccttgccgctggtggtgttgcagccggtcaatcagggcggcatgttctcgcgc
ctgatggactatgtgaagttgaaaatctga
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