Sphingomonas radiodurans: LLW23_02215
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Entry
LLW23_02215 CDS
T08717
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
srad
Sphingomonas radiodurans
Pathway
srad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
srad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LLW23_02215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srad03400
]
LLW23_02215
Enzymes [BR:
srad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LLW23_02215
DNA repair and recombination proteins [BR:
srad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LLW23_02215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
WBH16957
LinkDB
All DBs
Position
473246..474646
Genome browser
AA seq
466 aa
AA seq
DB search
MRLVTLSAPDDFDAWRDAARGLLADSVPAEDVVWQVGAEAGDLFAAVATPRADPVGPAFK
VPRAFLDLARNAILHRDPERFALLYTLLARLRRETGLIEDHADPLVRRLEGLAKHVRRDI
HKMRAFLRFREVIDDGTSRYVAWFEPDHHIVRANAAFFVNRFASMHWSILTPEVSLHWDG
AALSEGPGAQKSDAPEGDPIEEVWKTYYASIFNPARVKVSAMLKEMPRKYWKNMPETALV
PQLLASAQARESGMIAKARDEARTDLGGNSQIAWEALREEAMGCTRCHLYKPATQTVFGQ
GPVSASIMFVGEQPGDQEDLAGQPFVGPAGQVFDRALGEAGIDRGETYVTNAVKHFKFEP
RGRRRIHAKPDAGEIEACRWWIDQEQMLVRPKVTVALGATAARSLFGKVMTIGRERGRAL
KLPDDGGEAWITVHPSYLLRLPDEAARVSEFARFVEDLKLAKAAAA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgcggctggttactctttccgcgccggacgatttcgacgcttggcgcgatgccgcgcgt
ggcctgctcgcggatagcgtgccggcggaggacgtcgtgtggcaagtcggcgcagaggcg
ggcgatctgtttgcggcggtggccaccccgcgcgccgatcccgtgggaccggcatttaag
gtgccgcgtgctttcctcgatctggcgcgcaacgccatcctgcatcgcgatcccgagcgc
ttcgcgttgctctacacgctgctggcgcggctgcgacgcgagaccgggctgatcgaggat
cacgccgatccgttggtgcggcggctggaggggctcgcgaagcatgtccggcgcgatatc
cacaagatgcgcgcgttcctgcgtttccgcgaagtgatcgacgacggcaccagccgctat
gtcgcgtggtttgagcccgatcatcatatcgtgcgcgccaatgcagccttcttcgtcaac
cgcttcgccagcatgcattggtcgatcctgacgcccgaagtgtcgttgcactgggacggc
gcggcgctgagcgaaggccccggtgcgcagaagagcgatgcgcccgaaggcgatccgatc
gaggaggtgtggaagacctattatgcgtcgatcttcaatccagcgcgcgtgaaggtgagc
gctatgctgaaggagatgccgcggaaatactggaaaaacatgcccgaaaccgcgctagtg
ccgcagttgctggcgtcggcgcaggcgcgcgagagcgggatgatcgccaaggcccgtgac
gaagcgcgcaccgatctgggaggcaatagccagatcgcctgggaggcgctgcgcgaagag
gcgatgggttgcacgcgctgccacctctacaagccggcaacgcagaccgtgttcgggcaa
ggcccggtttccgcgagcatcatgttcgtcggcgagcagccgggcgatcaggaggatctg
gccgggcaaccgttcgtcgggccggcggggcaggtattcgatcgcgctttaggcgaggca
gggatcgatcgtggggagacctacgtcaccaatgcggtgaagcatttcaagttcgagccg
cgcgggcggcggcgcattcacgccaagcccgacgctggcgagatcgaggcgtgccgctgg
tggatcgaccaggagcagatgctcgtacgcccgaaagtgacggtcgcgctgggggcaacc
gcggcgcgatcattgttcggcaaggtgatgacgatcgggcgtgagcgcgggagggcgttg
aagctgcccgatgacggtggtgaagcctggatcacggtgcatccgagctatctgctgcgg
ctgccggacgaggcggcgcgcgtgagcgaatttgcacggttcgttgaagatctgaagctg
gcgaaggcggcggcggcatga
DBGET
integrated database retrieval system
