Staphylococcus ratti: LN051_05345
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Entry
LN051_05345 CDS
T08246
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
srai
Staphylococcus ratti
Pathway
srai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
srai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LN051_05345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
srai03400
]
LN051_05345
Enzymes [BR:
srai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LN051_05345
DNA repair and recombination proteins [BR:
srai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LN051_05345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_4
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
nSTAND3
AAA_12
T2SSE
AAA_22
AAA
AAA_14
HHH_5
AAA_18
DEAD
AAA_28
ABC_tran
TsaE
AAA_16
Zeta_toxin
Mg_chelatase
Rad17
UvrD-helicase
AAA_29
Nore1-SARAH
RsgA_GTPase
LIP
PUB
UvrD_C
NACHT
PhoH
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UEX91043
LinkDB
All DBs
Position
1105493..1107868
Genome browser
AA seq
791 aa
AA seq
DB search
MENPTLFEQSYIKGNIEVILFQNSDNYYTVLKVEVEDTNEDFDTIATVVGYFPNIVESET
YTFKGQIAEHPKYGKQLKAETFQKELPQTRDAVIQYLSSDLFKGVGKKTAESIVDTLGEK
AIQVILKDTSVLEKVPKLSKTKQQQIAEQVIQNQESEQIMIRLNELGFGAKLAMDIYKFY
KGETLNIIEQNPYQLVYDIRGVGFHKADQLANLIGISENHPNRLKAGIQYVVEETCIKQG
HTYLPKEALLTEAYTLLTKQIESDIETALIEDVLTQLIEEKRLIEDEGQVAIPSLYYSEL
KSTQNVYKVMHNQITLDTFDQSEVQLHIGEIEEKNGVAYATAQKEALESAMKHKMMILTG
GPGTGKTTVIKGIVHLYATLHGISLDYNDYTDEDYPIVLAAPTGRASKRLHDATGLEAMT
IHRLIGWNQETQPEDILENEITAKLIIIDEMSMVDTWLFHQFMAAVPNDAQVVLVGDEDQ
LPSVGPGQVFKDLIASKVLPRINLTEVYRQQDGSSIIALAHRMKSGQTVDITERFHDRSF
IPCHVDQIPEVVQKVVTNAVQKGYDMSDIQVLAPMYRGNAGIQRLNKILQNILNPLAEEE
QREIQFGDVMFRKGDKVLQLVNRPNDNIFNGDIGVIVGIFWAKENALNKDVVVVDYEGNE
ITYLKSDLTELTHAYCTSIHKAQGSEFPIVIMPIVKQYFRMLQKPILYTGLTRAKQSLVF
LGDAEAFNIGLKTEGQVRFTRQQSFLEQYFQNHQEDEAAPEVLTEATMFQIDPMINMNHV
SPYDFLEIDNA
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacccaacactttttgaacagtcctatatcaaaggcaatattgaagtcatcttg
tttcaaaacagtgataattattacactgtacttaaagttgaagttgaagacaccaatgaa
gactttgatactattgcaacagtagttgggtatttccctaatatagtagaaagtgagacg
tatacatttaaaggtcaaattgctgaacatccaaagtatggaaagcaattaaaagctgaa
acgtttcaaaaagaacttccacaaacgagagatgcagtaattcaatatttgtcgagcgac
ttatttaaaggcgtcggtaagaaaacagctgaatcaatcgtagacactttgggcgaaaaa
gcaatacaagtgatattaaaagacacatctgtgctagaaaaagtgcccaaactttctaaa
actaagcaacaacaaattgctgaacaagtcattcaaaatcaagaaagcgaacaaattatg
attcgcttaaatgaacttggatttggggcaaaattggcgatggatatttacaagttttat
aagggagaaactttaaatattattgaacaaaatccatatcaattagtttatgatattaga
ggtgtcggttttcataaagcggaccaattagcaaatttaataggtatatcggaaaatcac
ccaaaccgattaaaagcagggattcaatatgttgtagaagaaacttgcatcaaacaaggt
catacgtatttaccgaaagaggctttacttaccgaagcgtacacgcttttaacaaaacaa
attgaatctgatattgaaacggcgttaatcgaagacgtcttaacgcaacttattgaagaa
aagcgcttaatcgaagacgagggccaagttgccattccgagtttatattattcggaactg
aaaagcacacaaaatgtgtataaagtcatgcataatcaaattacattagacacgtttgat
caatcagaagtacaattgcatattggtgaaattgaagaaaaaaatggcgttgcctatgca
accgctcaaaaagaagcacttgaatctgccatgaaacacaaaatgatgatattgaccgga
ggaccaggaacgggtaaaactacggtaattaaaggcattgtgcatctttatgcgacattg
catgggatttcattagattataatgattatactgatgaagattatcccattgtactcgca
gcaccaacgggacgtgcatctaaacggcttcatgatgccaccggcttagaagcgatgacc
attcatcggcttatcggttggaaccaagagacgcaacctgaggatattttggaaaatgaa
attacagccaaacttattattatcgatgagatgtcgatggtagatacttggttgtttcat
caatttatggctgctgtaccaaatgatgcacaagtcgtattagttggcgatgaagatcaa
ttgccatcggtaggtcctggtcaagtttttaaagatttgattgcatctaaagtgcttccg
cgtattaatttgacagaagtttatcgtcaacaagacggctctagtattatcgcgctagcc
caccgcatgaaatctggccaaactgtagacattacagaacgttttcatgaccgttctttt
atcccatgccatgttgatcaaattccagaagttgttcagaaggttgtcacaaatgccgtt
caaaaaggatatgatatgtctgatatccaagtgcttgcgccaatgtatcgtggtaatgca
ggaattcagcggcttaataaaatacttcaaaatatcttaaatcctttagccgaagaggaa
caaagagaaattcaatttggcgatgtgatgtttcgaaaaggagacaaagtcctacaactt
gtcaatcgtccgaatgacaatatttttaatggcgatattggtgtgattgtaggcattttt
tgggctaaagaaaatgcgcttaataaagatgtcgtcgttgttgactatgaaggaaatgaa
atcacatatttaaaatcagatttaacggaacttacgcatgcttactgtacgtcgattcat
aaagcacaagggtctgaatttccaattgttattatgccgattgtgaaacagtattttcga
atgcttcaaaaacctatcctttatactggattgacacgggcgaagcaatcattggtattt
ctcggagatgccgaagcttttaacattggtttaaaaacggaagggcaagtgagattcacg
cgtcaacaaagctttttagaacagtatttccaaaatcatcaagaagacgaagctgcgccg
gaagtactaaccgaagcaacaatgttccaaatcgatccaatgatcaatatgaatcacgtt
agcccgtatgattttttagaaattgacaatgcctga
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