KEGG   Streptomyces rapamycinicus: M271_24675Help
Entry
M271_24675        CDS       T02907                                 

Definition
(GenBank) DNA ligase
  KO
K10747  
DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
src  Streptomyces rapamycinicus
Pathway
DNA replication
Base excision repair
Nucleotide excision repair
Mismatch repair
Brite
KEGG Orthology (KO) [BR:src00001]
 Genetic Information Processing
  Replication and repair
   03030 DNA replication
    M271_24675
   03410 Base excision repair
    M271_24675
   03420 Nucleotide excision repair
    M271_24675
   03430 Mismatch repair
    M271_24675
Enzymes [BR:src01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     M271_24675
    6.5.1.6  DNA ligase (ATP or NAD+)
     M271_24675
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     M271_24675
DNA replication proteins [BR:src03032]
 Eukaryotic Type
  DNA Replication Elongation Factors
   Other elongation factors
    M271_24675
 Prokaryotic Type
   Elongation factors (archaeal)
    Other elongation factors
     M271_24675
DNA repair and recombination proteins [BR:src03400]
 Eukaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     M271_24675
   NER (nucleotide excision repair)
    Other NER factors
     M271_24675
   MMR (mismatch exicision repair)
    Other MMR factors
     M271_24675
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
6097057..6098595
Genome map
AA seq 512 aa AA seqDB search
MLLADVALTSRQVAATAARTEKIAALARLFRRTEPAEAAVVITYLAGKLPQRRTGVGWST
LRHRREPAAEPTLAVLDVDEALSRVAAVAGTGATAARKRLVGELLSAATKEEQGFLLGLI
GGELRQGALEGLAVEGLAEAVGAPAAEVRRAVMLGGSLGAVAEALLARGPEALADFRLEV
GRPVLPMLAQSAKDLDEAMDRLGACAVEEKLDGIRVQVHRDGEEVRIYTRTLDEITERLP
EVVTAARELAVDRAILDGEVILLDAEGRPRPFQETSGRVGSRLDVAGASAALPLSPVFFD
LLMVDDRDLLDLPAHERHAELARIAPGPRRVRRLVADDPADPETRRAAGEFAADVLARGH
EGVLVKGLEAPYGAGRRGASWLKVKPVHTLDLVVLAAEWGHGRRTGKLSNLHLGARAPDG
TYVMLGKTFKGLTDVMLEWQTEALLGIAVSDDGWVVRVRPELVVEVAFDGLQRSSRYPAG
VTLRFARVLRYREDKPADQADTVETVLALRGG
NT seq 1539 nt NT seq  +upstreamnt  +downstreamnt
atgctgctggctgatgtcgcgctgacctcccgccaggtcgcggccaccgccgcccgcacg
gagaagatcgccgcactggcccggctgttccggcgtacggaaccggccgaggcggccgtg
gtgatcacctacctcgcgggcaagctgccccagcgccgcaccggagtgggctggtcgacc
ctgcgccaccggcgggaacccgccgccgagccgacgctcgcggtgctcgacgtggacgag
gccctgagccgggtcgcggcggtcgccggcaccggtgcgacggcggcccgcaagcgactg
gtgggcgagttgctgtccgccgcgaccaaggaggagcagggctttctgctcggcctgatc
ggcggggagctgcggcagggggcactggaggggctggccgtggaggggctcgccgaggcg
gtcggcgcaccggccgccgaggtgcggcgggcggtgatgctcggcgggtcgctgggcgcg
gtggccgaggcgctgctggcgcgcggcccggaggcgctggccgacttccggctcgaggtg
gggcggccggtgctgccgatgctcgcgcagagcgccaaggacctcgacgaggccatggac
cggctgggggcgtgcgcggtcgaggagaagctggacgggatccgggtgcaggtgcaccgg
gacggcgaggaggtacggatctacacccgcaccctcgacgagatcaccgagcggctgccg
gaggtggtcacggcggcgcgggagctggcggtggaccgggcgatcctcgacggcgaggtg
atcctgctggacgcggagggacggccccggccgttccaggagacctcgggccgggtcggc
tcccggctcgatgtggccggggcgtcggccgcgctgccgctgtcccccgtcttcttcgat
ctgctcatggtggacgaccgcgatctgctcgacctcccggcccacgagcgccatgccgaa
ctggcccggatcgcccccggaccccggcgggtgcggcggctggtggccgacgacccggcg
gatccggaaacccggcgggcggccggtgagttcgcggcggacgtgctggcccgggggcat
gagggggtgctggtcaaggggttggaggcgccgtacggcgcgggccggcgcggggcgtcc
tggctgaaggtcaaaccggtgcacacgctggatctggtggtgctggcggcggagtggggg
cacggccgccgcaccgggaagctgtccaacctccatctgggcgcgcgggcgccggacggc
acgtacgtgatgctgggcaagacgttcaaggggctgaccgacgtgatgctggagtggcag
acggaggcgctgctggggatcgcggtcagcgacgacggctgggtggtgcgggtgcggccg
gagctggtggtggaggtggccttcgacgggctgcagcgctcgtcccgctatccggcgggc
gtcaccctgcggttcgcgcgggtgctgcgctaccgggaggacaaaccggcggaccaggcg
gacacggtcgagacggtgctggcgctgcgcggcgggtga

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