Streptomyces rapamycinicus: M271_28045
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Entry
M271_28045 CDS
T02907
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
src
Streptomyces rapamycinicus
Brite
KEGG Orthology (KO) [BR:
src00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
src03016
]
M271_28045
Enzymes [BR:
src01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
M271_28045
Transfer RNA biogenesis [BR:
src03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
M271_28045
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AGP57071
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All DBs
Position
6880140..6880799
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AA seq
219 aa
AA seq
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MRLFAAVLPPEAAVAELAARVKALRALPGADGLRWTEREGWHFTLAFFGEVAEDVLPELH
TRLARAAHRHHPHELRLAGGGRFDDRVVWVGVDGDSEALRRLADSAEAGGRRAGVPMDRH
RPYHPHLTIARARARSSGHGSPHHGSSHHGSSHHGSSGHGSPHHGSTTSLAPYVDGLMDF
AGREWTVGELSLVRSHPPAPGVPGQQPRYEVVAAWPLGH
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgttgccgccggaggcggccgtcgccgagctggccgcgcgg
gtcaaggcgctccgggcgctgccgggggcggacgggctgcggtggaccgagcgggagggc
tggcacttcacgctcgccttcttcggtgaggtggccgaggacgtactgcccgagctgcac
acccggctggcccgcgccgcccatcggcaccaccctcatgagctgcgactcgcgggcggc
ggccggttcgacgaccgggtggtgtgggtgggcgtcgacggcgacagcgaggccctgcgg
cggctggccgactccgccgaggcggggggccgccgggccggggtcccgatggaccggcac
cgcccgtaccacccgcatctgaccatcgcccgcgcccgcgcccgctcctcggggcacggc
tccccgcaccacggctcctcgcaccacggctcctcgcaccacggctcctcggggcacggc
tccccgcaccacggctccaccaccagcctcgcgccgtacgtggacgggctcatggacttc
gcgggccgggagtggaccgtgggcgagctcagcctggtgcgcagccatccacccgccccg
ggcgtccccgggcagcagccgcgctacgaggtggtggcggcctggccgctggggcactga
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