Spirosoma radiotolerans: SD10_25840
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Entry
SD10_25840 CDS
T03819
Name
(GenBank) TonB-dependent receptor
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
srd
Spirosoma radiotolerans
Brite
KEGG Orthology (KO) [BR:
srd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
srd02000
]
SD10_25840
Transporters [BR:
srd02000
]
Other transporters
Pores ion channels [TC:
1
]
SD10_25840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec
CarboxypepD_reg
FecR_C
STN
MetallophosN
EF-hand_5
Big_1
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
AKD57811
UniProt:
A0A0E3VA67
LinkDB
All DBs
Position
6345586..6349080
Genome browser
AA seq
1164 aa
AA seq
DB search
MNHLSKTMTKQLIALGLLLVIGSIPAQAQLLASSNRYASYQSRTTDTRLISLKSALGELE
KHYGVSFIYPTNLVNTKVIMTNRHDQNLEAELTSLLTTTGLTYRKVQPNFYAIVSMKEKN
NRLFRKIEHIDSKVNSDQTSEAVTLPTQTINKLERIGWSMTSAQPLADINGKVLDKNGQG
IPGVSVIIKGTNRGTTTNATGDYNLNAPDNATLVFSFVGYVSQEVPVSSRSRITITLQDD
VKALSEVVVVGYGTQKRASVTGAISSVSAQEVTQLPVPSVEQAIQGRVPGVTVVGNGSPG
ETPIVRIRGIGSINYAANPLYVIDGFPTSDLNNFDTRDIESVDVLKDASSAAIYGSRAAN
GVIIVTTKKGTGDGKLHVNYDGYVGTQSAWRQLDLLNRDEYIQFGTALRTNAGQPVPTRF
ANLNQPIYAGATQTYAQTDTDWQKAVFRNAPITQHSVQLSGGNEKSRFYSSVGYFNQQGI
MIGTGYKRGNFRINSDHAISKRFSFGQTLTISYDDKLNEVSAGGRTQVQNMIRMTPYMPV
EDPTLPGGYRGPDGSDGSDPQNPVRAALQDQSTTQRMKILGSAYVDVKIIDGLTYRLRGG
IDYVSARTFSFLPIYSESFNARALASISDDRYTYSSPLISNQLTYEKTFGKHSLNVVAVA
ERQAGNTLEIIGTGQAASNTIRELSAVISTSAGLTGTRSQNVLLSYLGRVNYEYAGKYLL
GASFRRDGSSRFAPGNKWGNFPSVSAGWRVSEEAFLKNVPAISELKLRASYGTMGFNGIG
DYSWQVAVSQNTNAILGDARAQGTYFDRLGNTDLRWEVTKMSNFGVDLGLFSNSITLSAE
VYQRNTDGLILNQPIAPSIGYSQSPIVNVGSMRNNGVEMQLGYNKTKGAFRFNASGNISF
ISNKVLSLGPTVSPLLNGANADYGGGDITRTEAGQSVQYFYGYRVAGIFQNADEIKAAPT
QDNAKPGDLRFVDTNGDGKIDANDRVNLGSFLPKFTYGLNLSANYRGFDMSLFFQGVQGN
KIYNGVKVLEQGMLRLFNAGTDVLRAWTPTNTNTDVPRAVDGDPNGNTRTSDRFIEDGSY
LRLKNLSIGYSVPSGVLQSFSRGTLSRARVYVASTNLLTFTKYTGYDPEVGSRTSNTNPT
LTNGIDYGQFPQARTFMVGLQLGF
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacctttccaaaactatgactaaacagctaattgcacttggtttgctgcttgtg
attggtagtatacccgctcaggcccaacttctggcttccagcaatcggtatgcttcctat
cagagccggacaaccgacactcgcctgatttcgctcaaaagtgccttaggtgaacttgag
aagcactacggcgtatcattcatttacccaaccaatctggttaatacgaaagttatcatg
accaatcggcatgaccagaatctggaggctgagttgaccagtctattgaccacgacgggg
ttgacttaccggaaagttcaaccaaatttctacgccattgtgtcaatgaaggaaaagaat
aaccggctttttcggaaaattgagcacatcgactccaaggttaattccgatcagacaagc
gaggccgtgacgttgcctacacagacaatcaacaagcttgaacgaattggctggtccatg
acgtcggctcaaccgctggccgatatcaatggaaaggtgctggataaaaacgggcagggt
attcccggcgtcagcgttattatcaaaggaaccaaccggggtaccacaaccaacgccacc
ggcgactataatctgaacgcaccagacaacgcaacactcgtttttagcttcgtaggctat
gtgtctcaggaagtaccggtatcgagtcgaagccgcattacaatcacattacaggacgat
gtcaaagcgctcagcgaagtcgttgttgttggctatggtacacagaagcgggcatcggta
accggcgcgatctcgtcggtatcggcgcaggaagtgacccaactgccggtacccagtgtc
gagcaggctattcaggggcgcgtgcccggcgtgaccgttgtagggaacggctcgcccggc
gaaaccccgattgtgcgcatccggggtattggctcaattaactatgcagccaatccgctg
tatgttatcgatggctttccgaccagtgatctcaataacttcgacactcgtgacattgag
tcggtcgatgtgttgaaagatgcttcctcggccgctatttatgggtcgcgggcagccaac
ggcgttattatcgttacaacaaaaaaaggaaccggcgatggtaaactacacgtcaactac
gacgggtacgtgggtacgcaaagtgcctggcgtcaacttgatctgctgaatcgggacgaa
tacattcaatttggaacggccttgcgcaccaatgctgggcagccggtgccaacccgattt
gcgaacctaaatcaacccatttacgccggggcaacccaaacctacgctcaaacggatact
gactggcagaaagcggtgtttcggaatgcgcccattacccagcatagcgttcaattgtcg
ggtggcaatgaaaagtcacgtttttattcatctgttggctatttcaatcagcagggcatc
atgattggaacgggctacaagcgcggcaatttccgtatcaactccgaccacgccatcagc
aagcgtttttcgttcggtcagacgctcaccatctcctatgatgacaaacttaacgaagtc
agtgctggtggccgaacgcaggtgcaaaacatgatccggatgacgccttacatgcccgtt
gaagacccaacgctgcccggtggctaccgtggccctgatgggtcggatggctccgatccg
caaaacccggtacgggctgccttgcaggatcagagcactacccaacgcatgaagattctg
ggtagcgcgtatgtggatgtgaaaatcattgacggcctgacgtaccggctacggggtggt
atcgactatgtgtcggcacgtacgttttcattcctgcctatttatagcgaaagcttcaac
gcgcgtgctttagccagtatatccgacgaccgatacacttattcgtctcccctgatctcg
aatcagttaacctacgaaaagacctttggcaagcattcgctgaatgtcgtggctgttgcg
gaacggcaggcgggcaacaccctggaaataattggaacgggtcaggcggcttcgaacacc
atccgtgagttgagtgcggttatcagcacgagtgcaggcttaaccggcacccgctcgcaa
aacgtgctcctctcctatttgggccgtgttaattacgaatatgccggaaagtatttactc
ggtgcctcgttccgtcgtgacggctcatcccggttcgctcccggcaataagtggggcaac
ttcccatcggtatcggcaggctggcgggtcagcgaagaagctttcctgaaaaatgttccg
gccatttcagaactgaaacttcgggcaagttatggcaccatgggcttcaacggcattggt
gattactcatggcaggtagccgtttctcaaaataccaatgccatcctgggcgacgcccgg
gcgcagggaacctacttcgaccggctgggtaatactgatttgagatgggaggtaaccaag
atgagcaacttcggggtggatttgggcttgtttagcaacagcatcaccctttctgccgaa
gtttatcagcgcaacacggatggcctgattctgaatcagcccattgcgccctccattggc
tactcgcagtcgccgattgtgaacgtcggcagcatgcggaacaacggggtagaaatgcaa
ctgggctacaataaaacaaaaggcgcttttcgttttaatgcatcgggcaacattagtttt
atcagcaacaaagtgctaagtctggggccaacggtttcgccattgctgaatggagccaat
gccgattacggcgggggcgacatcacccggaccgaagccgggcagtcggttcagtatttc
tatggctatagggtagcaggtatcttccagaacgccgatgagattaaagcagcgcctacc
caggacaatgccaagccgggtgacctccgcttcgtggatacaaacggcgatggtaaaatc
gacgcgaatgaccgtgtaaatctgggtagtttcctgcctaaattcacgtatggcctaaac
ctttccgccaactacagagggttcgatatgtccctgttttttcagggtgttcagggcaac
aaaatttataatggggtgaaagtgctggagcagggaatgctgcggctgttcaacgccggg
acagatgtcttacgagcctggacaccaaccaacacgaatacggacgtgccccgggctgtc
gacggcgaccctaacggcaatacccgtacatcagaccggtttattgaagacggttcttac
ctgcggttaaaaaatctgagcattggctattctgtaccatcgggcgttctccagtcgttc
tcccgcggaacactaagccgggcccgggtatatgtagcctcaacgaacctgctgaccttc
accaaatacacgggctacgacccagaagtcggctcacggaccagcaataccaatcccacg
ctgaccaatggcatcgactatggtcagtttccacaggcccgcacgtttatggtaggttta
caacttggtttttaa
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