Salpingoeca rosetta: PTSG_00314
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Entry
PTSG_00314 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
sre
Salpingoeca rosetta
Pathway
sre03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PTSG_00314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sre03009
]
PTSG_00314
Ribosome biogenesis [BR:
sre03009
]
Eukaryotic type
Pre-60S particles
RNases
PTSG_00314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-GeneID:
16067559
NCBI-ProteinID:
XP_004998864
UniProt:
F2TW48
LinkDB
All DBs
Position
Unknown
AA seq
1025 aa
AA seq
DB search
MMDQDQGSVATTAPQQGQPQQQQQQEQQQQQQQQQQEHEQKQQEQQQQEQQQQQQKQKPG
KGARRRQNRKKKKEKRKRMQLTCTQPNQALKLRGVAAILHTLLGFGTVAPKSHGFRLEHQ
ERLGQVRVLLVQGLSPDSLRTCQRVVGVPFGEPEAALSSSPKTNASKNDTPAQQLQVKDE
GATGVASTGVASTSTSAPSSEPTQPSEATPTPSFKRVLKLPGADAFVEIGSIALLNSVPP
PRYQQKKQNKSKKNNSSSQGSSAHDENDDRITWTDLLLTEQQLIDNEYLPVTDTASHASQ
PASASRSSPSTATTSSSAAPPPSYWQLPDARHSGNGNHGQSAGGTDGASKTTAPTAPAAV
VPPQQHQHEQQQQQQQQMSPRVFALDCEMCITDNGFELTRISIIDERDRVVLDTLVQPPN
PIRDYVTKYSGITAAMLEGVTTTLADVRRAMCSIMTRHDILVGHSLENDLRALSLRHTRI
VDTAILYQGTRRGGYKPKLKTLAESHLQRRIQREGQVTPQQSGVARVGDGGDDDGDDCDG
GDVAQENKQGAAVSVSTVMARVSTTRTPAQSGASTAQDDGTKDKGATAAKTTSLSREVAV
AQVITTAQGSTSMVAAQATTTTTATTTTTTTTTTAAVQHQQRKRAAHEATTSSATNSNAN
TSNSTTTSNNDSKQSGATDRAHTTEAMSTSTATGPATATDGDDDDDEEQQVKRAKSEDGA
SVAAPAEQVSMVVQNPSTTATTTTTTTTTASKSSVVLASAASHGHCSIEDARACLHLAQL
KLEKGRSSLRPPDEETNVFVHTRRRLERQQQQREEEQEERRRRRRRMDEGEDGDGGNGGG
EDGDGGNGGGEDGDGGKEKGGGKQGDARGQGSATPAGVRQFDPKHTGCVIGSHFLCQAMS
KFGVHVVQADTLAEAKRAVNGSVARASKLLVVETAALDQALGRGEAVADAATTVHELVQA
LAPTDAHANDLLLVVGLGERHLYRAACQRRTAIRKQTGRIPPPDADFKAAVADARVGVLL
CYHAP
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatggatcaggatcaagggtctgtggccacaacagcccctcaacaagggcaaccacag
cagcagcagcagcaggagcagcagcagcagcaacaacaacaacagcaggagcacgagcaa
aagcagcaggaacagcagcagcaggaacagcagcagcagcagcaaaagcaaaaaccaggc
aagggtgcacggcgccgccaaaaccgcaagaagaagaaggagaagcgaaagcgcatgcag
ctgacatgcacacaacccaatcaagcactgaaactgcgcggcgtcgccgcaatcctgcac
accctccttggttttggcactgtcgccccgaagagccacggatttcggctcgagcaccag
gaacgcctcgggcaggttcgcgtccttcttgtgcaaggcctctcgcccgactccctgcgc
acgtgccagcgagtcgtgggtgttccgtttggtgagcctgaagcagcactttcatcttca
cccaaaaccaacgcaagcaagaacgacactcccgctcaacagctccaagtcaaggatgag
ggcgcaacgggcgtcgcttcaacgggcgtcgcctcaacgtcaacgtcagccccatcgtcg
gagcccacgcagccgtcagaagcgacaccgacgccctccttcaagcgggtgctgaagctg
ccgggtgcggatgcgtttgtggagattggatccattgctcttctgaactccgtcccacca
ccccgctatcagcagaagaagcagaacaagtccaagaagaacaattcttcctcgcaaggc
agcagtgcacacgacgagaatgacgaccgcatcacgtggaccgacctcctcttgacggag
cagcagctcatcgacaacgaatacctgcctgtcaccgacacagccagtcatgccagccag
ccggcaagcgcgtcgcggtcctcgccgtccacagccaccaccagcagcagcgctgcacct
ccgccatcgtactggcagctgcctgatgccaggcacagtggcaatggtaaccacggccaa
agcgccggcggcactgatggtgcgagcaagacaacagcaccaacagcaccagcagcagtc
gtaccaccacagcaacaccagcacgaacagcagcagcagcagcagcagcaaatgtcaccg
cgggtgtttgctctcgactgtgagatgtgcattacggacaatgggtttgagctgacgcgc
atctcgatcattgacgagcgcgatcgcgttgtgctggacacgctggtgcagccgccaaac
ccgattcgcgactacgtgaccaagtacagcggcatcacggctgccatgctggagggcgtc
actaccaccctggctgacgtgcgccgcgcaatgtgcagcatcatgacgcgccacgacatc
ctcgtcggccactcgctcgagaacgatctccgcgcgctctcgctgcggcacacacgcatc
gtcgacacggccatcctgtaccagggcacgcggcggggcgggtacaagcccaagctgaag
acgctggcagagtcgcacttgcagcgccgcattcagcgggaggggcaagtcaccccacag
cagagcggtgtggctcgtgttggtgatggtggcgatgatgatggtgatgattgtgatggt
ggcgatgtggcacaggagaataagcagggggcggccgtgtcggtgtccacggtgatggca
agagtctcgacgacacgaacgccggcgcaatcaggcgcatcgactgcacaggacgatgga
acaaaggacaagggtgcgaccgcagcaaagacaacgtcattatcacgtgaggtggcagtg
gcacaagtcatcaccacagcgcagggcagcacttccatggttgccgcacaggcaacaacc
acgaccacagccacgaccacgaccacgactacgactacaacggcagcggtgcagcatcag
caaaggaagcgggcagcacacgaggcaaccacaagcagcgctaccaacagcaacgctaac
accagtaacagcaccaccaccagcaacaacgacagcaagcagagcggcgccacggaccgc
gctcacaccaccgaggcaatgtccacatcgacagccacaggaccagcaaccgctacagac
ggcgatgacgatgatgatgaggagcagcaggtgaagcgggcaaagagcgaggacggcgcg
agtgttgcggcgcccgcagaacaggtcagcatggtggtacagaacccttccacaacagcc
acgacgacgacaacaacgacaacgacggcgtcaaagtcatcggttgtgcttgcgagcgct
gcgtcccacgggcactgcagcattgaggacgcgcgcgcgtgtctgcatctggcgcagttg
aagttggagaaggggcggtcgtcgctcaggccgccggacgaggaaaccaatgtcttcgtg
cacacgcgcaggcggctggagcggcagcagcagcagcgcgaggaggagcaggaagagagg
aggaggaggaggaggaggatggacgaaggcgaggatggtgatggtggtaatggtggtggt
gaggatggtgatggtggtaatggtggtggtgaggatggtgatggtgggaaggagaaaggt
ggtggtaagcaaggggatgcgcgtggacaggggagtgcgacacctgctggtgtgcggcag
tttgatccaaagcacactggttgcgtcattggttcgcactttctgtgccaggccatgtcc
aagtttggcgtgcatgtggtgcaggccgacacgcttgcagaggcgaagcgggcagtgaac
ggcagcgttgcacgggcgagcaagctgcttgtcgttgagacggctgcgcttgaccaggcg
ttggggcgtggggaagcggttgctgatgccgcaacgacggttcatgagttggtgcaggca
ctggcgccgacagacgcacacgcaaacgacctcctgcttgtcgttggtctcggggagcgc
cacttgtaccgtgctgcgtgccagcgtcgcactgcaatccgcaagcagacgggccgcatc
cccccgcccgacgcagacttcaaggcggctgtggctgacgcgcgcgtgggcgttctcctc
tgctatcacgccccgtag
DBGET
integrated database retrieval system