KEGG   Salpingoeca rosetta: PTSG_00883
Entry
PTSG_00883        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K18730  PERQ amino acid-rich with GYF domain-containing protein
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_00883
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     PTSG_00883
   Surveillance factors
    Other surveillance factors
     PTSG_00883
SSDB
Motif
Pfam: GYF DUF2205
Other DBs
NCBI-GeneID: 16078947
NCBI-ProteinID: XP_004998352
UniProt: F2TXR8
LinkDB
Position
Unknown
AA seq 1330 aa
MDKSGDPKPRRSSARDTLSTSRHDAARPNPYRYSRKTILELFNPSVPAPDGLDDCGELYS
KQVSKPLGLTDWTDAELEVRREGPPPAARREPARSDVHNPRVPAGRGGRGFFSRTSDRLP
NRGRGHAPEGHYVRVDFGGAPSSPKSYGNRPRVPRGRRPISEAHAFQRNWRRSDTDEPAA
PSRGNGGRQDTAWEEPNDADPFTFSGGRRSRHNSTKEPPAPPGLDTDTAAAPTMPKWNYI
DKKGISQGPFESNSMHHWLSNNFFKDDLPVKRASDSGFVTLKQVFEYLKQRNIPADHLFA
KPLPTDFDDFMATATASSTEPSADTTANATAAPAAAAAAVQQQQQHQQQQQQQPVQAEQH
SLPSTPLRSEAPLQVSQPPAAQQQQMPQSPMQQHVPSAQQYFAPAQDRQHPQHHQQQQQA
HGMYQQGAAMSPHAQSMHPSSQAQQPPNVWQQQQQRTSSFGSVSEMPGQSAVGTLQMGSP
SSHVEAPSSPSAYPNAPYHQQHTPSHQDYRAHQYAQQQQQQQQPQQYAPQHQHQQAMYQQ
QQQVHHQPASAASSATHPMLMTSQATEGPVHAPQHGTDLLAHLRAGSNAPSAPVQPQQQH
QQHRQVSQQFQQSPQQAPAYQHEDQRAAMLAQQQQQQQRQRQASVGSGPGTPAAVGSFDL
PADANQWSLETVTQRIGVVRTAHKQLHSEAAALAETMSGLMAEHKAIQQQQAQAPPELAA
RLHQVLETVTARAEEVGQRYRQLQESDIQMQQHHAQLLALQHSIAAKHAQQQQQQQQQQQ
QQQQQQHHQVAPTQVQQPAAQQQQQALPQQQGGASRTSTSRAPLPRIESLALNDQVAPAA
TDGDDHDDVFVDDSGKQSQGAWGEVPVHHDGDNWDIEGVTETQWDDSQQASKEADKKAQP
KKAAPAPTAAASSASGKPSAWGRNARRSGSAAAAADTSNPTAPTTAAPVAAPPTAAKSTH
QPSLSEIEAEQARIAKEQEEERKRIEENQMRLMMTVTQAKSRGAATTAASNGGATSGAWT
QPSAWGSQSKAAPTLRDIERQEQMRQKQIKKKQQQRMQSAAVPPAAKGKSWLQAVGADPA
PPPVQKGRSLLDIEAEERTRTVQRKPAATATAKVAAKAPVPWSAGAKGNQASAPQARHQH
QQHRPAQRHADEDDSFWGSVTARAPPSSSAKTVSKPSSAIAARKTPVKASKSKGKGKGGK
NAAKEVPIRKEFMGWCKKEIGALTSDVDAETLVKVLLEIPQPEDVIDFVTEQLGERARKF
SKAFLQKRATAFEGDAGQVLPTVDDDSWQPSKSTKTKKKRRFKKVSGPDLLTFNVAPGSS
LNRGGRDFAK
NT seq 3993 nt   +upstreamnt  +downstreamnt
atggacaagtctggagacccaaagccccgtcgctcctctgcccgcgacacgttgtccacg
agccgccacgacgctgctcggcccaacccttaccgctacagccgcaagaccatccttgag
ctgttcaacccttctgtccctgctcccgacggccttgacgactgtggcgagctgtactcc
aagcaggtttccaagccgctcggtctgaccgactggacggacgccgagctggaggttcgc
cgcgagggtccgccacctgctgcccgtcgtgaaccagcgcgttctgatgtgcataacccg
cgcgtccccgctggccgtggtggccgtggcttcttctcccgcaccagcgaccgcctgcca
aaccgcggccgaggccatgctcccgaaggccactacgtccgcgtcgactttggcggagca
cccagcagccccaagtcgtatggcaaccgcccccgcgttccccgtggccgccgccccata
tcggaggcgcacgccttccagcgcaactggcgccgctcggatacggacgagcctgctgcc
ccttcccgcggcaatggtggtcgccaggacacggcctgggaggagccaaacgacgccgat
cctttcaccttctctggtggccgcagaagccgccacaactcgaccaaggaacctcccgcc
ccacctggacttgacaccgacaccgccgctgcccccaccatgcccaaatggaactacatt
gacaagaaaggcatcagccaaggcccctttgagagcaactccatgcaccactggctttcc
aacaacttcttcaaggacgacctccccgtgaagcgtgcctcggactctggttttgtcacc
ctcaagcaagtgtttgagtacctgaagcagcgcaacatcccagctgaccacctctttgcc
aagcccctgcccaccgatttcgacgactttatggccaccgctaccgccagcagcacggag
ccctccgccgatacgaccgccaacgccaccgccgcccccgcagccgctgcagcggccgtc
cagcaacagcaacagcaccagcaacaacagcagcagcagccagtgcaagccgagcagcat
tcccttccatctacgccccttcgctctgaagccccactccaagtgtcccaaccgccagca
gcccagcagcagcagatgccccagtctccaatgcagcagcatgtgccgagcgcgcagcag
tactttgcacccgcacaggatcgccagcacccgcagcaccatcagcagcagcagcaggcc
cacggtatgtaccagcaaggtgccgccatgtccccacacgcccagagcatgcacccgtcc
tcccaagcgcagcagccacccaacgtgtggcagcagcagcagcagcgcacctcgtccttt
ggttctgtgagtgaaatgcctggccagagcgcggtcggaacgttgcagatggggtcacca
tcttcacacgttgaggcgccctcctcccccagcgcctatccgaacgctccctaccaccag
cagcacaccccttcgcaccaggactaccgcgcacaccaatacgcccagcagcagcagcag
cagcagcagccccaacaatatgccccacaacaccagcaccagcaggccatgtatcagcag
cagcagcaggtacaccaccagccggcctccgctgcatcctcagcgacccaccccatgctg
atgacgtcgcaagcgacagaaggccccgtccacgcccctcagcacggcaccgatctgctg
gcgcacttgcgcgccggttccaacgccccttccgctccggttcagccccagcagcagcat
caacagcatcgtcaggtgtcccagcagttccagcagtcgcctcagcaggcccctgcttac
cagcatgaagaccagcgtgcagccatgcttgcacaacaacagcagcaacagcagcgccag
cgccaggcctctgttggctctggtccagggacgcctgctgctgtgggcagctttgacctg
ccagcggacgcaaaccagtggtcgctggagacagtgacgcagcgcattggcgttgtgcgc
accgcccacaagcagctgcacagcgaggcggcagcgctggcagagaccatgagcggcttg
atggccgagcacaaggcgatccagcagcagcaggcgcaggcgccgcccgagcttgccgcg
cggctgcaccaggtgcttgagacggtgactgcccgcgcggaggaggtgggccagcgctac
cgccagctgcaggagagcgacatccagatgcagcagcatcatgcccagctgcttgcgctg
cagcattcgattgccgccaagcacgcacagcagcagcagcagcaacagcagcaacaacaa
caacagcagcagcaacagcatcatcaggtggctccaacacaggttcagcaacctgctgct
caacagcagcagcaagcgctgccgcagcagcagggcggggctagtcgcacttccaccagc
agggcacccttgccgcgcattgaatcgctggcacttaacgaccaggtcgcgcctgcagcc
acagacggcgacgaccacgacgacgtgtttgtggatgacagcggcaagcagtcgcagggt
gcgtggggcgaggttcccgtgcaccacgacggcgacaactgggacattgagggtgtcacc
gagacgcagtgggacgacagccagcaggcatccaaggaagctgacaagaaggcacagccg
aagaaggcggcgcctgctcccacagcggccgcgtcgtcagcgagcggcaagccgtctgcg
tggggccgcaacgcgcgtcgcagtggctctgcggcagcggctgcagacaccagcaacccg
accgcgcccacaacagcagcacccgtagcagcgcctcccacggcggcgaagagcacacac
cagccgtcgctgtctgagattgaggccgagcaggcgcgcattgccaaggagcaggaggag
gagcgcaagcgcatcgaggagaaccagatgcgtctcatgatgacggtgactcaggccaag
agccgcggtgccgccaccacagctgcgtccaacggcggtgcgacgagcggtgcttggacg
cagccgtctgcgtggggctctcagagcaaggctgcaccgaccctgagggacattgagcgt
caggaacaaatgaggcagaagcaaatcaagaagaagcagcagcagcgcatgcaaagcgcg
gcagttcctcccgctgccaagggcaagtcgtggctccaggctgttggcgcagacccagcc
ccgccaccagtgcagaagggtcggtcgttgctggacatcgaggctgaggagcgcacgcgt
actgtgcaacgaaagcccgcagccactgccaccgccaaggttgccgccaaggcgcccgtg
ccgtggtccgcaggcgccaagggcaaccaggcatccgcaccccaggcgaggcaccagcac
cagcagcataggcctgcgcaacggcacgctgacgaagatgactccttctggggctctgtc
accgcccgcgcacccccgtcatcgtctgcaaagacggtgtccaagccttcatctgccatc
gccgctcgcaagacccctgtcaaggcgagcaagagcaagggcaagggcaagggcggcaag
aacgctgccaaggaggtgccgattcgcaaggaatttatgggctggtgcaaaaaggagatt
ggcgcgctgacgagcgacgtggatgcggagacgcttgtgaaggtgctgcttgagattcca
cagccggaggacgtgattgactttgtcacggagcagctgggcgagcgcgcccgcaagttc
tccaaggcgttcctgcagaagcgcgcgacggcgtttgagggcgacgcgggacaggtgttg
ccgacggtggatgatgactcgtggcagccgtccaagtccacgaagaccaagaagaagcgg
cggttcaagaaggtttccggcccagacctgctcaccttcaacgtcgccccagggtcaagc
ctcaaccgcggtggccgcgactttgcaaagtga

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