Salpingoeca rosetta: PTSG_01973
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Entry
PTSG_01973 CDS
T04136
Name
(RefSeq) protocadherin gamma B6
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
EGF
EGF_2
Protocadherin
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
16078554
NCBI-ProteinID:
XP_004997958
UniProt:
F2TZH8
LinkDB
All DBs
Position
Unknown
AA seq
1024 aa
AA seq
DB search
MARPLGRALARSPRRRHPSPACTGMLVTAGLLLASLLLGVAVAQNTPPTFQGTPFIELYI
FNVPETNDPTSTVGTVTATDPDAGQTLQYTLSGSGSAAFKIDRNTGVVTSRLPLDADFGT
TTYDDITVSVSDGVDSTTGRILIAITDVNDNSPVFNQDLYTMKVAEDLEADVTFASVEAV
DVDVSTQNSRVTYFIIGGDPDGIFQIATVSGEGRVSVATQLDYERNRTHTLVIEARDGGT
PTRTGNTTLFIEVTDVNDNVPVFSQSLYEVNLPETLRERPARRRRAVGTVLVTISATDDD
TGDNAEVRYSITGGNELGLFALDEVTGDFTLEKPVDFEELTNPVLDITVVATDLGGAVSD
PATIRVTVQDRDDLPVFESDQLPELTIFAGDIGPVGFAPVVDDSRKNTFECRLTTPGTPF
TVAAATSGATGCNIVAQSSTTELGGQMFTLMLEIADQVGVLSRTRVVVNVLPTNRDPPEF
AMDIFDVLLSVATQIDTTVVDLGVTDPDGDAVSCKLLSSPKGLFRIDDCQLVLDSRLPTD
GPTFFDLLVEASDAPTRGNRNLTSTAHVQITLTGVCPSDDASCTCADEGATPPNCTPDLC
EAFPCVNDGVCSQGVSNQGLPERKCMCANFFGGDDWRGGRPTTTTTTTTTTTTTTTTTSP
LATVTFTVPDDDEINDCSQCQNGGTCVRTPTGQVTCDCPRVQQGRFELCYENADCTSQLP
CDQVPFPRGDATGSSTSTPATRPELTCECPRVRQGGVERCYEDARCTNLSPCDEVPFPRG
DASVSTTAAATVTFTVPDQFTVSDCTLCQNGGVCAFTASGQQFCQCPRVPIGSTDFCYEN
FDCTSLQPCDQVDGPNGDRSASTNSTTAVPIAVIVGGAVGGVVMLIIVVVVIVRWRCRSK
RRVAVVKEGPQAYAENPIPVTVRSSGEGDYDVVEAVYPNVNMRETHVGLGGRRPGRRHST
MSDGSDVRGLHQWNATVYDVGHQESDGGRMHAHDWDAGDYDIKNSSPPYETVGKRQQSTP
ASAC
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcccacttggccgggcactcgcccgcagcccccgccgccgccacccatcaccg
gcatgcaccgggatgcttgtgaccgcggggctgctgctcgcatccttgttactcggagtg
gcggtggcgcagaacacaccgcccaccttccagggcaccccctttattgaactgtacatc
ttcaacgttcccgaaactaacgacccaacatcaaccgttggcaccgtcactgcaacagac
cccgatgcggggcagaccctccagtacacgctgtctgggagtggctctgccgcgttcaaa
atcgaccgtaacacgggtgtggtcacgtcgcgccttccgctcgacgcagactttggcacc
accacctacgacgacatcaccgtgtctgtctcagatggcgtggactcgaccacgggccgc
atcctcatcgccatcacggacgtcaacgacaactcgcccgtcttcaaccaggacctgtac
acgatgaaggtggctgaggatctcgaggcggacgtgacgtttgcgtctgtggaggcggtg
gacgtcgacgtctcgacgcagaacagccgcgtgacgtacttcatcattggcggtgacccg
gatggcatcttccagattgccaccgtcagcggtgagggcagggtctctgttgccacgcag
cttgactacgaacgcaacaggacccacacgcttgtgattgaggcacgggatggtgggacg
ccgacccgcacaggcaacaccaccctcttcatcgaagtcaccgacgtcaacgacaacgtg
ccagtgttcagccagtcgctgtacgaggtcaacctgcccgaaaccctccgcgagcgcccc
gcccgccgccgccgcgccgtgggcactgttctggtgaccatctccgccacggacgacgac
acgggcgacaacgccgaggtgcgttactccatcaccggcggcaacgagctcggcctgttt
gccctcgacgaggtcactggcgacttcaccctggagaagcccgtcgactttgaggagctc
accaaccccgtgctcgacattactgtcgtggccacggaccttggcggcgccgtgtctgac
ccggccaccatccgcgtcaccgtgcaggaccgcgacgacctccccgtctttgagtcggac
cagctgccggagctgaccatcttcgccggcgacattggccccgtcggctttgcccccgtc
gtcgatgatagccgcaagaacacgtttgagtgccgcctcaccacccctggcaccccattc
accgtcgccgccgccacgagcggcgccaccggctgcaacattgttgcgcagtcctccacc
acggagctcggcgggcagatgttcaccctcatgctggagattgccgaccaagtcggcgtg
ctgtcgcgcacccgcgtcgtcgtcaacgtgctgcccaccaaccgcgacccgcccgagttt
gccatggacatctttgatgtcctcctctccgtggccacgcagattgacaccaccgtggtg
gaccttggcgtgacagaccccgatggcgacgccgtgtcctgcaagctcctctcctccccc
aagggcctcttccgcatcgacgactgccagctcgtgctggactcgcgcctgcccacggat
ggccccaccttctttgacttgcttgtggaggcgtcggatgcgcccacgcgcggcaaccgc
aacctcacgtccacggcccacgtgcagattacgctcacgggcgtgtgcccgagcgacgac
gcgtcctgcacatgcgcggacgagggcgccacgccgcccaactgcaccccagacctgtgc
gaggccttcccttgcgtcaacgatggcgtgtgctcgcagggcgtgagcaaccaaggcctg
cccgagcgcaagtgcatgtgcgccaacttctttggtggtgacgactggcgaggtggacgc
cccacgaccaccaccacgacaacgacgacgacgacgaccacaaccacgacgacatcgccg
ctggccactgtgacgttcacggttcccgacgatgacgagatcaacgactgctcccagtgc
cagaacggcggaacgtgtgtgaggacacccactggccaggtgacgtgcgactgcccacgc
gtgcagcagggccgcttcgagctgtgctacgagaacgccgactgcacctcgcagctcccc
tgtgaccaggtgccgttccctcgtggcgatgccacgggctccagcacgtccacgcctgcc
acccgccctgagctgacgtgcgagtgcccgcgcgtgcgccagggcggtgttgagcgctgc
tacgaggatgcccgctgcaccaacctgagcccctgcgacgaggttcctttcccccgcggc
gacgcctctgtctccaccaccgctgctgccaccgtcacctttaccgtgccagaccagttt
actgtctcggactgcactctgtgccagaacggcggcgtgtgcgcgttcactgccagcggc
cagcagttctgccagtgcccccgcgtgccgattgggtcaaccgacttttgctacgagaac
tttgactgcacgtcgctgcagccgtgcgaccaggtggatggccccaacggcgaccgctcc
gcgtcgaccaactcgacgacggctgtgcccattgcagtgatcgtgggcggcgcagtcggt
ggtgtggtcatgctcatcattgttgttgtggtgattgtgcggtggcggtgtcgaagcaag
cggcgtgttgccgttgtcaaagaaggcccgcaagcatatgcagagaatcccataccagtg
accgtgcggtcttctggcgagggcgattacgacgtggttgaggcggtctatcccaatgtg
aacatgcgcgagacgcatgttgggcttggagggcggcgaccgggcagacggcactcaacg
atgagtgacgggagcgacgtgcggggacttcaccaatggaacgcaaccgtgtacgatgtt
ggacaccaagaaagcgatggtggaagaatgcatgcacacgactgggatgcaggcgactac
gacatcaagaattcatcaccaccttacgagacagttggaaagcgacagcaatcgactcct
gccagcgcatgctga
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