Salpingoeca rosetta: PTSG_03172
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Entry
PTSG_03172 CDS
T04136
Name
(RefSeq) uncharacterized protein
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIA
Motif
Other DBs
NCBI-GeneID:
16076345
NCBI-ProteinID:
XP_004995758
UniProt:
F2U4F6
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MTCVLPSTFGEELGQEEEDEALDLSTVDNSRWAVDSRSPLFPGLSPAVLPSPITSKDPSC
HQQQQRQQHVRLATHNAAPMHPPSPSFSCLFDTRPSTRGSKSVRAPTTAPACLACRSTKP
KRTASAAKGTLQSSPRPSLLGHNVVLPNRRNKRRYNRMLCVKATPASSPSPLPAPPRRPR
PSHKRRRRRRRHLLKPLLRHSNHTCTSDADDEASDDAEDSHDAPFTVASCTPPGTKQAQA
RPTESDGLPSPVDGGPSSTTNHSTTHQQPTTNHGAEPNHNGSIDSGTKLGNTPAASPASS
SSSSSSSNEGSSTSSSSSDSSSSSSSNSSSSSSDISDISDSSNSSDSSNSSDISDSDNDN
DSSSHSSGSNSTSSSSNSSSSEDKSGGGSSSSTTTSSSGSSDSGSSSSSNHSGSSTSSSS
DSSSSDINDNNDNNNNTNNNNSNNRTTTTTITNNNSNSSSNNSIISISSDSSHNSSSHGD
VQHVVAGTGAPTSTPPSSKTDTLLRGHSHNSSRTNFSVPPVRGTPDQVLTGTAPAISVSR
DGSSTAHAQRAQLSSQSIYITSSVSSTAAAASTTAAVLSAASTTQFSLAHPPAHHNQLQQ
NPLPSQQQQQHQHQHQHHQQQQQQHQQHQQHQQQQQWRRLRWQQQWRQWQHVQHLQYQQQ
QKEVRATFLRDYRAWQQARLRRRLKPRRLIARTSDESIPGSPKTPKCKRGTSRLPDLKRL
PLLLQACALRLSGPSRPPQAFQRYLELSDRAFRHTAKGRDEQIQVGSQKRKKRGAKRGKA
NKRCKPNSRRGGGHDDGGSDDDDDDDDDDDDDDDDDDDDDDDDDDDDDGHRGRRDSHVGD
IFDPTAPSAASVTATTAISSKHHNTNTDGQNSDSGGDRSSAARDWRHPTEREQALMDTIA
KDCQLTLTSRQVDFDQSARLHEMQRLRIEAFRRWHEATVANPAAPCFAHDSWVQSLALTD
APENERTRNLTQLLQLVWLRIHTGQAAIRRHDPSGDHVRKVDGIITCLQKLLARAREVPV
PPSEHTTDGEGFFLCHQCGLWRATKKATAPICAPCSSFTFKHFKLFRQNFPELTLLHELP
LFIWDAMSRFYEPGAVGCPCPSGPSCDCACSLITDACSVCRFLRGFAISIIYNSWPAMMR
PLSRPVRPFTTKDLDGLDLRVVYNPHRDGKPPVLKSLPKQREWHAERYREKARTTARSAE
VDDILQLLYIMKGEPPPSPPPPPPPPQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQQRPERGRVLLDENVANALFAGGGSAPPPVSGTSPDAAKIATSTAAATEHVAAS
DATPASVEQDADSSLAPRHINTLPAFVLPKGRRPPLWSSANHSSSTLPSRSCTRQQGTTQ
LPPPARNPPQSTPTTQAPRMPAPTTQAPWMPAPTTQAPWMPAPTTQAPRMPAPTTQAPWM
PAPTTQAPRMPAPNTRPPQALPAPTTQAPHALVSPQQGPLARQQVQPLVEQQHVLDMREV
ERQRQYQIELEKRGKENYRRAVYFDQVRRGLKEASLALKIIRRRKRASRTKQSREHHRHA
DSAEAVFIDDDDDDDDDDDDDDDTVTDEEGEDGCKGDDNDEEEEEEEEEEEEEEEGESHD
DDSSSDGDRQEGNGTGGGQEHVSRRLHLAFDDLPPNQERPHMRLLNLWLKHVLVEQQRYV
RGEKKLLRETLKDIVRSKGRLRQVRAQHQELLKERRAAYERLRHIRNVLFYRNQLFKGRS
DDGDDSEQGRAASQPQSAQQQTQAQQEQPENPPQQQQQQQQQQQQQQQQQQQQQQQQQQQ
QQQQQQQHLLPHDFQPCPRYPLQQEQQQQQQRQYRQQVGGILERLRRHTLPPPYQEQLQA
ILHFWAHNPQLTLHHQSQVQAMLLFLNQQEKQERQPQQKQQQK
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgacatgcgttctcccttcgacgtttggggaagagcttggacaagaggaagaagatgag
gctttggacttgagtaccgtcgacaatagtcgttgggctgtcgacagtcgcagccctctc
ttccctggcctctcaccagctgtacttccttcacccatcacatccaaagatcccagctgc
catcaacagcagcaacgacagcaacacgttcgcttggcgacgcacaatgccgccccaatg
cacccgccatcccccagcttctcctgtctgttcgacactcgtccatccacacgaggcagc
aaaagcgtccgcgctccaacgactgctcctgcatgcctcgcttgcagatcgacaaaaccc
aagcgcacggcttccgcagccaagggcactcttcaatcttcgccacgcccttccttgctc
gggcacaacgttgttcttcccaacaggcgcaataagcgccgttacaaccgcatgctctgt
gtcaaggccacgccggcgtcttcaccatcgccactaccagcaccaccaaggcgcccccgc
ccctcgcacaagcgacggcggcgacgacggcggcaccttctcaagccgttgcttcgacac
agcaaccatacgtgcacttccgacgccgacgacgaagcatctgatgacgctgaagattcc
cacgacgccccgttcacagtcgcaagctgcacaccgcctggcacgaagcaagcacaagcc
cgtcccaccgaaagcgatgggctgccctcgcccgtcgatggtggcccgtcttcaaccaca
aaccattcgacgacacaccagcagccgacgaccaaccacggagcagaacccaaccacaac
ggcagcatcgacagcggcaccaagcttggcaacacgccagcagcgtcccccgcctcttct
tcgtcctcgtcctcttcctcaaacgagggctcgagtaccagcagcagcagcagcgacagc
agcagcagcagcagcagcaacagcagcagtagcagcagcgacatcagcgacatcagcgac
agtagcaacagcagcgacagtagcaacagtagcgacatcagcgacagtgacaatgacaat
gatagcagcagtcacagcagtgggagtaatagcacgagcagcagctcgaacagctcgagc
tcagaagacaagagcggcggcggcagcagcagcagcaccaccaccagcagcagtggcagt
agcgacagtggcagcagcagcagtagtaatcacagtggcagcagcaccagcagcagctca
gacagctcaagctcagacatcaacgacaataacgacaataacaacaataccaacaacaat
aacagcaacaacagaaccactaccaccaccatcactaacaacaacagcaacagcagcagc
aacaatagcatcatcagcatcagcagtgacagcagtcacaacagcagcagtcatggggat
gtgcaacatgttgtcgcaggtactggtgccccaacgtctacaccgcccagcagcaagacc
gacacgcttcttcgtgggcacagtcacaactctagtcgcaccaactttagcgtgccaccc
gtccgagggaccccggaccaggtgctgaccggaacagcgcccgcaatcagcgtgagcaga
gacggttcctccactgcgcatgctcaacgggcgcagttgtcaagccaatccatctacatc
acctcatctgtctcatccaccgcagctgcagcatctacaacagcagcggtgttgtctgct
gcgtctacaacacaattctcgctcgctcaccccccagcccaccacaaccaactccagcaa
aatcctttaccgtcacagcagcaacaacaacaccagcaccagcaccaacaccaccagcag
cagcagcaacagcaccagcagcaccaacagcaccaacagcagcaacagtggcggcggctt
cggtggcaacaacagtggcggcagtggcaacacgtgcagcacctacaatatcaacagcaa
caaaaggaggttcgggccacctttctacgggactacagggcttggcagcaagcgaggctt
cgccgtcggcttaagccacgtcggctgattgcgcgcacgagcgacgagtcgataccaggt
tcacctaaaaccccaaaatgcaagagaggcacgtcacgccttcccgacctgaagcggctg
cccctgctcctgcaagcatgtgcattgcgtttatcaggcccaagcaggccaccgcaagcg
tttcagcgctatcttgagctctcagaccgcgcctttcggcacactgcaaagggcagggat
gagcagatccaagtgggctcacagaagcggaagaagcggggagcgaagcggggcaaagcg
aacaagagatgcaaacccaacagcaggcgtggtggtggtcatgatgatggtggtagtgat
gatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgatgat
gatgatgatgatgatgatgatgatggtcatcgtggtcgtagggacagtcacgttggagac
atttttgaccctacggctccttctgcagcctcggtcacggccaccaccgccatctccagc
aaacaccacaacaccaatactgatggccagaacagcgacagcggtggtgatcggagcagt
gctgctcgtgactggcgccacccgacagaacgcgagcaggctctgatggacacgattgcg
aaagactgccagctcacgttgacatcgcggcaagtggatttcgaccaatccgcgcgctta
catgagatgcagcggttgaggattgaggcattcaggcgatggcacgaggcaaccgttgca
aacccggccgccccttgctttgcgcacgacagctgggtgcaatcgctcgccttgacagat
gcccctgaaaacgagcggacccgaaacttgacgcagctgcttcagctggtgtggctgagg
atacacaccggccaagccgcaattcgccggcatgacccgagtggggaccacgttcgcaaa
gtggatggcatcatcacgtgccttcagaaactgcttgccagagcacgtgaagtgcctgtt
ccaccttctgagcacacgacagacggcgagggattctttctctgccatcaatgtggcctc
tggcgagcaacaaagaaagccactgcgcccatttgcgcgccatgcagctccttcaccttc
aagcatttcaagctcttccggcagaactttcccgagctaactctgcttcacgaattgcca
ctgttcatttgggacgcaatgtctcggttttacgagcctggtgcggttgggtgtccctgc
cccagtggcccgtcttgcgattgtgcttgcagcctgatcacggacgcttgcagcgtttgc
cgatttctgcgcggatttgcaatcagcatcatctacaactcatggcctgcgatgatgagg
cctctgtcacgcccagtgcggccgttcacgacgaaagatcttgacggcttggatcttcgt
gtggtgtacaacccgcacagggatggaaaaccaccagtcctcaagtctttacccaaacaa
cgcgaatggcatgcggagcggtaccgcgagaaggcgcgtacaacggcgcgcagtgcagag
gttgatgatatactgcagctgctttacatcatgaaaggagagccgccgccatcaccacca
ccaccaccaccaccaccacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
cagcagcagcagcagcagcagcagcgtcccgaaaggggtcgtgtgttgcttgatgaaaac
gtggcaaacgcgctgtttgccggcggaggctctgcaccacccccagtctctggtacttcc
ccggacgccgcaaaaattgctacctcaacagcggctgccactgaacacgttgcggcctct
gatgcgacgcctgcttctgttgaacaggatgctgactcttcgctcgcgcctcgccacatc
aatacgttgccggcgtttgtgcttcccaagggtcggcgcccgcccttgtggagttcggca
aaccactcttcgtcgacgctgccatcacgctcgtgcacacgacagcagggaacgacgcag
ctgccgccacccgcaaggaacccgccacagtcgacaccaaccacacaagcgccaaggatg
ccagcaccaactacacaagcgccatggatgccagcaccaaccacacaagcgccatggatg
ccagcaccaactacacaagcgccaaggatgccagcaccaactacacaagcgccatggatg
ccagcgccaaccacacaagcgccaaggatgccagcaccaaacacgcgcccgccacaagcg
ttgccagcaccaaccacacaagccccacatgcgttggtgtctccacaacagggcccactc
gcacgtcagcaggtgcagcctcttgttgaacagcagcacgtgctggacatgcgcgaagtg
gagaggcagcgccagtaccagattgaattggagaagcggggcaaggagaattacaggcga
gcggtgtatttcgatcaggtgcggaggggtctaaaggaagcaagcctcgcgttgaagatc
atacgacggaggaagcgcgcatcgcgcaccaagcaatcgcgtgagcaccaccggcacgct
gactccgcagaagctgtctttatcgatgacgacgacgacgacgacgacgatgatgacgac
gatgatgataccgtcacagacgaggagggggaggatggttgcaagggtgatgacaatgac
gaagaggaagaagaagaagaagaagaagaagaagaagaagaagaaggggagagtcatgac
gatgacagcagcagtgatggtgatagacaggaagggaatggaaccggtggcgggcaagag
cacgtgtcgcgacggttgcacttggcatttgatgatctgccccctaaccaggagagaccg
cacatgcggctactgaacctgtggttgaagcacgtgcttgtcgagcagcagcgctacgtt
cgaggtgagaagaagctgctgagggagaccctgaaggacattgtacggagcaaaggtcga
ctgcgccaagtgcgagcgcagcaccaggagttactcaaggaacgccgggcagcgtatgag
cggctccggcacatcagaaacgtgttattctaccggaaccaactgttcaagggcaggagt
gatgatggtgatgattcagagcagggacgagcagcatcgcagccgcagagcgcacagcaa
caaacacaagcacaacaagaacagccggagaacccaccgcagcagcaacagcaacaacaa
caacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaa
caacaacagcagcagcagcagcatctgctaccacatgattttcagccatgtccgcgctat
ccccttcagcaagagcaacaacagcagcaacagcgccaatatcgacaacaagttggcggg
attctcgagcgcttgagaagacacacgctgccgcccccataccaggagcagctgcaagcg
atactccacttttgggctcacaatccacagctgaccctgcaccaccaaagtcaggttcaa
gcgatgcttctgttcttgaatcaacaggagaagcaggaaagacaaccgcagcagaagcag
cagcagaagtag
DBGET
integrated database retrieval system