Salpingoeca rosetta: PTSG_04052
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Entry
PTSG_04052 CDS
T04136
Name
(RefSeq) DNA ligase 1
Organism
sre
Salpingoeca rosetta
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
16075527
NCBI-ProteinID:
XP_004994949
UniProt:
F2U7M8
LinkDB
All DBs
Position
Unknown
AA seq
1207 aa
AA seq
DB search
MMDEETAATATMKRRVVKKMVVDDDDDDDDEGEEEEEELDVKGVQAVKEQQQQQHNNNQK
HSLTAARKRIIESDDEDEDEDEDKTDSDVESYAAFLFPGDSSDSKSQGGSDKGQKSKQTK
LQLGKLLQPPPRTAPASKAEPAPQQVTPDNKASAPASPSNQEQDCEQEQQQQKQPSGAED
DATPSKEPLPATPKEATKASASKHKNSDSTATDDGDLSHVQNYVNPKDWEAPKSTKPKDP
NYKPAWMRGTRRSAKRSAKPKSKAKKTAKTSKAKSASRSTSTSSPEESQTSTATPEATQD
MDTQPESCGDQEKAEAATSTRAAGSDDAGTRNCTDADTITARGDSNIDDDSDNNSDNSAS
GESMDTAEDTAAAEGNGAVTPEVEDRSDRSRDVQTPARPLDASNEKKKEQVNESTEAKAE
GVQQRSDGAEKQKQTQKEKDEKKKEGKDQGSALAGGDKTEKPAAAASSSKRTIMDMFFAP
RKAVKKSATKTGKASEVDKPKAPPATSPAAVSSTPTRRSADTNAAAAKTGTTTPANPPSS
SSSTTPGCDPSDFDPSAARYDPIASACWCRGQQVPYKALAATFKLVEATSKRLEIINTVC
NLFRSVMVLSPASLVHCIYLCTNDLAPAYEGIELGIGDSILMKAIQIASGRSLQQIRADM
ATIGDLGEVAAKSQSKQRKLTFGRKKKPLTVDAVFAKLKAIAVLKGQNSQQRKVDMIQGL
LVACQSSDEAKFLIRALGGKLRIGLAELSVLSALGQAIALTPPAQGEYPPPILDASKGVH
ADKFKATMEECTLKLKTVYCELPNYDYIIPILLEEGIDALSEKCGITPGIPMKPMLAHPT
KGVDEVLQRFDGKTFVCEYKYDGERAQVHRNEKGEMFIYSRNSENHTTKYPDVIANVPNA
FAEGVSDFVLDCEAVAFDMTSQQILPFQVLSTRKRKDATEDSVEVQVCLFAFDLLYLNGQ
SLVREPLHTRRSLLRSNFKHVQGRFQFADCLVTSDTDEIGMFLEQSIKDSCEGLMIKTLT
EDASYEIARRSHSWLKLKKDYLEGVGDTLDLVVIGGWLGKGKRTGTYGAFLLACYDEESE
EYQSICKIGTGFSDEDLKTHFEQLKPHVIPSPRNYYRYDSTLAPDHWFDAAQVWEVKAAD
LSISPRHKAAAGLVDAEKGISLRFPRFIRVRDDKKPDMATSAYQVADMYNSQDLVQNSRG
RPNGPPR
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgatggacgaggagacagctgcgacagcgacgatgaagaggagggtggtgaagaagatg
gtggtggatgatgatgatgatgatgatgatgaaggggaggaggaggaggaggaacttgat
gtaaagggagtgcaggcagtgaaggagcagcagcagcagcagcacaacaacaaccagaaa
cacagcctcactgctgctcgcaagcgcattattgagagcgacgatgaggacgaggatgag
gacgaggacaagaccgacagcgatgttgagagctacgctgcgttcctcttccctggtgac
agcagcgacagcaaaagccaaggcggcagcgacaagggccaaaagtccaagcagaccaag
ctgcagctgggaaagctactgcagcctccaccacgcacagcaccagcaagcaaagctgag
ccggccccacaacaggttacgccggacaacaaggccagcgcacctgccagcccctccaac
caggagcaagattgcgaacaagagcaacaacaacagaagcagccttctggggctgaggat
gatgccacgccaagtaaggagcccttgcccgcgacaccaaaggaagccaccaaggcctca
gcttccaagcacaagaacagtgacagcacagcaaccgacgatggtgatctgtctcacgtt
caaaactacgtgaacccaaaggactgggaggcccccaagtcaacaaagccaaaggacccc
aactacaagcctgcgtggatgcgcggcacgcgccgatccgccaagcgctcagccaagccc
aaatcaaaggccaagaagactgccaagaccagcaaggccaaaagcgcctcccggtccacg
tcgacctcatccccagaggagagccagacatccactgccacgccagaagcaacgcaggat
atggacacccagccagagagctgcggtgaccaggaaaaggcagaggcagcaacgtcaacc
agagctgctggttctgatgatgcgggcacccgcaactgcactgacgccgacaccattaca
gccagaggtgacagcaacatcgacgatgacagcgacaacaacagcgataacagcgccagt
ggggagagcatggacactgcggaggacacagcagccgcagaaggcaacggtgctgtgacc
cctgaggtggaagaccgcagtgatcgcagcagagacgtgcagacaccagcgcggccgctt
gatgcatcaaatgagaagaagaaagagcaagtgaacgagagcacagaggcaaaggccgaa
ggagtgcagcagaggagcgatggggcagaaaagcaaaagcaaacgcaaaaggaaaaggat
gagaagaagaaagaggggaaggaccaaggcagcgctcttgctggcggcgacaagacagag
aagccagcagctgctgcatcttcctccaagcggaccatcatggacatgtttttcgctccc
cgcaaagcggtcaagaaatcagcgacgaagacgggcaaagcatcagaggtggacaagccc
aaggcaccaccagccacatcaccagcggcagtctcatccacaccaacacggcgttcagcg
gataccaacgctgctgcggccaaaacaggcacaacaacaccagcaaacccaccatcgtca
tcatcatcaacaacacctggctgtgatcccagcgactttgacccgagcgcagcgcggtat
gacccgattgcgagcgcgtgctggtgccggggacagcaggtgccgtacaaggcgctggcg
gcgacattcaagcttgtggaggcgacgagcaaacgcttggagattatcaacaccgtctgc
aacctcttccgctccgtgatggtgctcagcccagcctcactcgtgcactgcatctacctg
tgcacaaacgacctcgcccctgcatacgagggcattgagcttggcatcggagattccatc
ctcatgaaggcaattcagattgcgtcagggcgcagtcttcaacagattcgtgcagacatg
gccaccatcggagacctgggggaggtggctgccaagtcccagtcgaagcagcgcaagctg
acgtttgggcgcaagaagaaaccgctcaccgttgatgctgtctttgcaaagctcaaagct
atcgccgtgctcaaggggcagaatagccagcagcgcaaggttgacatgatccagggcctg
ctggtcgcgtgccagtcgagcgacgaggcgaaattcctcatccgcgcactcggtggcaag
ctgcgcattggactggcggaattgagtgtactgagcgcactggggcaggcgattgcactc
accccgccggctcaaggggagtatccaccgcctattctggatgcgagcaaaggtgttcat
gcagacaaattcaaggcaaccatggaggagtgcacgctgaaactgaagacggtgtattgt
gagcttccaaactacgactacatcatcccaatcctcctcgaagaaggcatcgatgcgctg
tctgagaagtgtggcatcacgcctggcattcccatgaagccaatgctcgcccacccaaca
aagggcgtggatgaggtgctgcagcgctttgacggaaagacgttcgtgtgcgaatacaaa
tacgatggcgagcgtgcacaagtccaccgcaacgaaaagggcgagatgttcatctacagt
cgcaactctgagaaccacacaaccaagtacccagacgtcattgcaaacgtcccaaacgcg
tttgcggagggcgtatctgattttgtgctggactgcgaggccgttgcgtttgacatgaca
agccagcagattcttccgttccaagtgctcagcacacgcaagcgcaaggacgccacagaa
gacagcgtggaggtgcaggtgtgtctgtttgcgtttgatctcctctatctcaacggacaa
tcgctcgtacgggaaccgctgcacactcgccgctccctcctcagatcaaacttcaagcac
gtgcaaggtcgcttccagtttgcggactgcctcgtcacctcggacaccgacgagattggg
atgttcctggagcaaagcatcaaggacagctgcgaaggactgatgatcaaaacgctgacg
gaagatgcgtcctacgagattgcgcgccggtcccacagctggctcaagctcaagaaggac
tacctggagggggttggagacacgcttgatcttgtagtgattggtggatggctcggcaag
ggaaaacgcacgggcacatatggcgcttttctgcttgcgtgctacgacgaagagagcgag
gagtaccagagcatctgcaagattggcacgggcttctcggatgaggacctgaagacgcac
tttgagcagttaaagccgcacgtgataccgtcaccacgcaactactaccgctacgactcg
acactcgcgcccgaccactggttcgacgcagcgcaggtgtgggaggtgaaggctgcggac
ctgtccatctctcctcgccacaaggccgctgcgggcttggttgatgcggagaagggcatt
tcgctgcgctttccccggttcattcgcgttcgtgatgataagaagccagacatggccacg
tcagcatatcaggttgcggacatgtacaacagccaggacctggtgcagaacagccgtggt
cgccccaacggcccaccgcgctag
DBGET
integrated database retrieval system
