Salpingoeca rosetta: PTSG_04177
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Entry
PTSG_04177 CDS
T04136
Name
(RefSeq) coatomer subunit beta
KO
K17302
coatomer subunit beta'
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sre04131
]
PTSG_04177
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sre04147
]
PTSG_04177
Membrane trafficking [BR:
sre04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
PTSG_04177
Exosome [BR:
sre04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
PTSG_04177
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Coatomer_WDAD
WD40
NBCH_WD40
WDR54
Motif
Other DBs
NCBI-GeneID:
16075655
NCBI-ProteinID:
XP_004995075
UniProt:
F2U6T9
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MPLRLDIKQQLNARSDRVKCVDMHPSEPWMLAALYSGVVNIWNYESNTMIKTFEVSDVPV
RAARFIERKNWIVTGSDDMKIRVFNYNTLDKVHTFEAHTDYIRCLAVHPSQPYVLSCSDD
MTIRMWDWEQDWMCRQVFEGHSHYVMDVVFNPKDVNTFASCSLDRTIKVWQLGASSPNFT
LQGHEKGVNCVSYFSGGDKPYLVSGADDRLVKIWDYQSKACVQTLEGHTQNVCAVVFHPE
LPIILSGSEDGTVRVWHANTYNLESKLAYNMERVWSMATLPGSNSVAIGYDEGCIMIKLG
RERPAMSMDSNGKVVMARHNDVQQAIVTKVEGELVDGEAMQLSTKDLGACEIYPQSMQHN
PNGRFVVVCGDGEYIIHTALSFRNKAFGQALDFVWSADSSEYAVRESSTAIKTFKNFKEK
HAIRPDFYAEGIFGGVLLGVKGAGTLSFFNWDSQELVRRIDIACQDVFWSDDAEYVLVST
AEEGCFVLKYNSSAVTAAVAAGEPIPDDGIEDAFEVVDELDDDVKTGTWVGSCFIYTNQG
NRLNYYVGGEIVTVAHLDRAMYVLGYLASTGRVYLGDKELNIVSYNLPLAVLEYQTAVMQ
GDLDTADEVMPSIPADQRNRVAHFLEKQGYKQQALVVSMDPDHRFELALSLHKLLVARDI
AQELASPQKWKLLAEAAMKKSMFDLAEECLAHANDFSGQLLLYTASGKADKMATLADDAA
RAGRNNIAFVSLFLQGRLKECVDLLVESDRVSEAALFARSYLPSMVPEVVAKWKASLEEK
RPKLAQSLADPTEYANLFPDFEDTLALEEKLKAMNVHNQPAKSAAAHLAARASAPLKERL
ASTQPSATGSTSEPPADKTTAAPPATVVADEGEPDEASEPEMGEEDEQQEQEEQEEQKEE
QEEEEMTAPEVTQEAAAPAVEEKQAAEEEESKPPATAANDDDDDDDFDLDDDDLDLGDVD
PSLADDLIHTYFADHAQLPSDSTMDAKAAAETTKQLLQDPFTRQLVISVGMFVGFIYVIR
NHPDELKI
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttcgattggacatcaagcagcagctcaacgctcgcagcgaccgagtgaaatgc
gtggacatgcaccccagcgagccctggatgcttgccgccctttacagcggtgtggtgaac
atctggaactacgagtccaacaccatgatcaagacgtttgaagtgtctgatgtgccggtg
cgcgccgcgcggttcattgagcgcaagaactggattgtcacgggctcggacgacatgaag
atccgcgtgttcaactacaacacgctggacaaggtgcacacgtttgaggcgcacacggac
tacatccgctgcctcgcagtgcacccgagccagccgtacgtgctgagctgcagcgatgac
atgaccatccgcatgtgggactgggagcaagactggatgtgccgccaggtgtttgagggc
cacagccactacgtcatggacgtcgtcttcaacccaaaggacgtcaacacctttgcctca
tgctccttggaccgcaccatcaaggtgtggcagctcggcgcatccagccccaactttacg
ctccaaggccacgagaagggcgtcaactgtgtctcctatttctcgggcggtgacaagccg
tatctcgtctcgggcgccgacgaccgcctcgtcaagatctgggactaccagagcaaggcc
tgcgttcagacacttgagggccatacgcagaatgtgtgtgctgttgtgttccaccctgag
ctgcccatcattctcagtggatccgaggacggcaccgtccgcgtctggcacgcaaacaca
tacaacctggagagcaagctcgcatacaacatggagcgcgtgtggtcgatggccacgctg
cccggcagcaacagtgtcgccatcggctacgacgagggctgcatcatgatcaagcttggg
cgggagcgtcctgcgatgagcatggacagcaacggaaaggttgttatggccagacacaac
gacgtccagcaggcaatcgtcacaaaggttgagggcgagctggtggacggcgaggcgatg
cagctgtccacaaaagatctcggcgcatgcgaaatctacccacagtccatgcagcacaac
cccaacggccggtttgtcgttgtgtgcggcgacggggagtacatcatccacactgccctc
agcttccgcaacaaggcatttggccaggccctcgactttgtctggtccgccgactcgtca
gaatacgccgtgcgagagtcgtccacggccatcaagaccttcaagaacttcaaggaaaag
cacgccatccgtccagacttttacgccgaaggcatctttggcggtgttctgctcggcgtg
aagggcgccggtacgctctccttcttcaactgggactcccaagagctcgtgcgccgcatc
gacatcgcctgccaggatgtgttctggtctgacgacgcggagtacgtgcttgtgtcgact
gctgaggagggctgctttgtgctcaagtacaacagcagcgccgtcactgccgctgtcgcc
gccggtgaacccatccccgacgacggcatcgaggacgctttcgaggttgttgatgagctt
gatgacgatgtgaagacgggcacatgggtcggcagctgcttcatctacaccaaccagggc
aaccgcctcaactactacgtcggcggcgagatcgtcaccgtcgcccacctcgacagggcg
atgtatgtgctcgggtaccttgcgtcgacggggcgcgtgtacctcggcgacaaggagctg
aacattgtgtcgtacaacctgccgctcgctgtgctggagtaccagacggcggtgatgcag
ggcgacctcgacactgcggatgaggtcatgccgtccatcccggcagaccagcgcaaccgc
gtcgcacactttctcgagaagcaggggtacaagcagcaggcgctggtggtgtcgatggac
ccagaccaccgctttgagctcgccctcagcctgcacaagctcctggttgcccgcgacatt
gcacaggagctggcgtccccgcagaaatggaagctcctcgcagaggctgccatgaagaag
agcatgtttgaccttgcggaggagtgccttgcgcacgccaacgactttagcgggcagctg
ctgctgtacactgcgtctggcaaagcggacaagatggccaccctcgccgacgatgccgcg
cgcgccggccgcaacaacattgcctttgtgtcgctgttcctgcagggccgcctgaaggag
tgcgttgacctgcttgtcgagagcgaccgcgtgtcggaggcggcgctgtttgcccgctcg
tatctccccagcatggtcccagaggtcgtcgcaaagtggaaggcctctcttgaggagaag
cggcccaagcttgcgcagtcgctggcggacccgactgagtacgccaacctcttccccgac
ttcgaggacacgcttgctctcgaggagaagctcaaggcgatgaatgtgcacaaccagccg
gccaagtctgctgctgcacaccttgccgcgcgtgcttctgctccgctcaaggagcgtctc
gcttccacacagccatccgccacagggtcaacctctgagccgccagccgacaagaccacg
gcggcgccacccgcgaccgtggtggctgacgagggcgagccggatgaggcatcagagccc
gagatgggcgaggaggacgaacaacaagagcaagaggagcaagaggagcagaaagaggag
caagaagaggaggagatgacggcgcccgaggttacacaggaggcagcagcgccggcggtg
gaggagaaacaggcagcggaggaggaagagagcaaaccgcccgccacagccgcaaatgat
gatgatgacgatgacgactttgatcttgacgacgacgatcttgatcttggtgatgtcgac
ccaagcctcgcagacgacctgatacatacatactttgcagaccacgcacaacttccttca
gacagcacgatggacgccaaggccgcagcagagaccaccaagcagctcctgcaggaccct
ttcacaaggcaacttgttatctctgtgggcatgtttgttggcttcatctatgtgatccgc
aaccatcccgatgagctgaagatctaa
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integrated database retrieval system
