Salpingoeca rosetta: PTSG_05400
Help
Entry
PTSG_05400 CDS
T04136
Name
(RefSeq) glycosyl transferase
KO
K00710
polypeptide N-acetylgalactosaminyltransferase [EC:
2.4.1.41
]
Organism
sre
Salpingoeca rosetta
Pathway
sre00514
Other types of O-glycan biosynthesis
sre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
PTSG_05400
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sre01003
]
PTSG_05400
Enzymes [BR:
sre01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.41 polypeptide N-acetylgalactosaminyltransferase
PTSG_05400
Glycosyltransferases [BR:
sre01003
]
O-Glycan biosynthesis
Mucin-type
PTSG_05400
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glycos_transf_2
Ricin_B_lectin
Glyco_transf_7C
RicinB_lectin_2
CDtoxinA
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
16074551
NCBI-ProteinID:
XP_004993973
UniProt:
F2UAB7
LinkDB
All DBs
Position
Unknown
AA seq
562 aa
AA seq
DB search
MARLSMKRMVVRAAIIVALIFAAYKYGLFQSKTPFTYERRTFKDYKGGAPWRMHGILGLR
PDGTPGFPRAECPTNYNMAEELRSNGFFARLSDCLPLDRNITDGRHKSCRFVQYDLDNLP
DTSVIFVFYNEHPSVLLRSIHSVLNRTPPQLLKEIILVDDGSDLPWLGQPLEEYVQLLPK
VRIVRNEKRSGLVKARLRGVEESTAQTFTVLDSHIEVEEGWCEPLMARIKGDRTRVLMPQ
IDSINQETLDPVVGGIGCSLGFLWNLIEHSIPIQKKDQALRTTAIDAVRSPTMAGGLFTA
DREFFWHLGGYDTEFGFWGTENLEFSFRIWQCGGSLECMPCSRIHHIFRKGGHAYSLPPG
HVAKNKLRTAAIWMDDYGFIVKEAIGAAGKQPDIGPLDHMLELKQQLQCKSFDWYLKNVY
PEGIITDLSDIRALGTVKNTANNMCVDNMQHMYADAKMGAYACHGHGSQTFLILARTKEI
RPVGNLELCLTSDTTISWCESRHDVTWDYDQANMLLKNTKTQKCLAVGDGNNLVTEDCDL
HNDRHKWTFDDKHPDKHPAVHF
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atggcacggttatcgatgaagcggatggtggtccgcgcggccatcattgtggcgctgatt
ttcgcggcgtacaagtacggcttgttccaatcaaagacgcccttcacatacgagcgacgg
accttcaaggactacaagggaggtgcgccatggcgcatgcacggcatcctcgggctgcgg
ccggacggcaccccagggttcccgcgcgcagagtgccctacaaactacaacatggcagag
gaactgcggtccaacggtttcttcgcccgcctcagcgactgcctgccactggacagaaac
atcaccgatggccgccacaagtcgtgccgcttcgtgcagtacgacctggacaacctgccc
gacacgtccgtcatctttgtgttctacaacgagcacccgtccgtgctgctgcggtccatc
cacagcgtgctcaaccgcacgccgccgcagctgctcaaggaaatcatcctggttgacgat
ggcagcgacctgccgtggctcggccagcccttggaggagtacgtccagctcctgccaaag
gtgcgcatcgtgcgcaacgagaagcggtcggggctggtcaaggcacgactgcgcggcgtg
gaggagtcgacggcgcagaccttcacggtgctggacagccacattgaggtggaggaaggt
tggtgtgagccgctcatggcccgcatcaagggcgaccgcacccgtgtcctcatgccccaa
atcgacagcatcaaccaggagacgctggaccctgttgttggcggcattgggtgttcgctc
ggtttcctgtggaacctcatcgagcactccatccccatccagaagaaagaccaggccctg
cgcaccacggccattgatgccgtgcgctccccgacaatggctggcggcctcttcaccgcc
gaccgcgagttcttctggcacctcggcggatacgacaccgagtttgggttctggggcacc
gagaacctcgagttttcgttccgcatctggcagtgcggcgggtcgctggagtgcatgccg
tgctcgcgcatccaccacatcttccgcaagggcgggcacgcgtacagcctgccgccgggg
catgtggccaagaacaagctgcgcacggcagccatctggatggacgactacgggtttatt
gtgaaggaggcgattggggcggcggggaagcagcccgatattgggccgctggaccacatg
ctggagctcaagcagcagctgcagtgcaagagcttcgactggtacctgaagaacgtgtac
ccggagggcatcatcaccgacctctccgacatccgcgcgctgggcacagtcaagaacacg
gccaacaacatgtgcgtggacaacatgcagcacatgtatgcggatgcgaagatgggggcg
tacgcgtgccatggccacggcagccagacattcctcattctcgcacgcacgaaggagatc
cgacctgtgggcaacttggagctgtgcttgacctctgacacgaccatctcgtggtgcgag
tcgaggcacgacgtgacgtgggactatgaccaggcaaacatgctgctcaagaacacaaag
acgcaaaagtgccttgctgttggcgatgggaacaaccttgtcacggaggattgtgatctg
cacaatgacaggcacaagtggacttttgatgacaaacacccagacaagcacccggctgtc
cacttttga
DBGET
integrated database retrieval system
