KEGG   Salpingoeca rosetta: PTSG_05894
Entry
PTSG_05894        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K13100  pre-mRNA-splicing factor CWC22
Organism
sre  Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:sre00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sre03041]
    PTSG_05894
Spliceosome [BR:sre03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    PTSG_05894
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    PTSG_05894
SSDB
Motif
Pfam: MA3 MIF4G FAM199X
Other DBs
NCBI-GeneID: 16073358
NCBI-ProteinID: XP_004992787
UniProt: F2UD35
LinkDB
Position
Unknown
AA seq 981 aa
MSGDESSSSSNSSGDEGKRTRRRVSEDRPPKDVKPAEATATTTGAEGEDSTSRDAKPASE
APAEASAPAAAKSPTPERARRRRHTKKERGRRSGSSGSSGSSSSSSSSGSSSSSSDSDSD
GGKKDEKRRHQRRRSKRSSRSRSRSRSRSPRHRRHHRGSKERAEPDPQELARKRGKTKTE
PNPIMTRAGGAYIPPARLRAMQQNITDKSSKEYQRLAWQTLRKQINGFINKVNVSNIQSI
VVDLFGANLVRGRGLFARSCMKAQASSPTFTHVYAGLVAVVNTKLPSVGKLILSRLVLQF
RKRYRLNDKLTCLNTARFIAHLINQQVAHEILALEILALLLEHATDDSIEVAVAFLKEVG
QYLNDVAPRGLNSTFDALRDVLHQGQISKRTQYMIEVMFAVRKDGFKDHPIVPEGLDLVE
ESDQITHLISLDDEIDPQSKIDVFQYDPQYEENESKYAAIKREILGDESSGESSSGDESS
SDEDEDEEEEAAQTAAGGEGGQAIMDMTGTDLVAFRRTVYLTIMSSINYEEAAHKLMKLN
LPPGHESELCNMVIECCSQERSYLKMYGLLAERLCLLRREYQDAYVAAFADQYVTIHRLE
TKPLRQIAKLFAHLLYMDAIPWTALEVIHLNERETTSSSRIFIKELFLEVSSAMGLETLI
ARLRDPTLQRSLAGLFPLDSPKDTRFSINFFTTIGLGALTDDMREALKNAPKRLMQAKTE
DVSSDESSSGSSSSSGSSSSSSSSSSSGSDSDSDSGSSSSSSSSSSSGSDSDDDRDRRRD
RGRERSVRRSSPPRSPPPRDRRISAGSRASNPPRSSPPRDAKAPAPRDASPPRHHDTRAS
RDERDERDRDHDTRASRGDDAAREERRVRRTPPRSPADRRRRPQYRRPSRSRSRSRSHSR
ARSRPRSRSRSRSPRRRRRSPRASRTSRSSRRSRSPLARRDRDRDRDRDRDRRRSRSRSP
RYRRHTRRPDSDDENDRKRAK
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgtctggcgacgaaagcagcagcagcagcaacagcagtggcgatgagggcaagcgcacc
agacgccgtgtcagtgaagatcgtccaccaaaggacgtgaaaccagcagaggccacagcc
accacgactggtgccgagggtgaggattccacttcccgcgatgcaaagccagcatcagag
gcgcccgcagaggcatcggctcctgcagccgccaagtcgccaacaccggagcgtgcacgc
cgtcgccgacacacaaagaaggagcgcggtcgcaggtccggcagctctggctcaagcggc
agcagcagcagcagcagcagcagtggtagcagcagctcctcgagcgacagtgacagcgat
ggcggaaagaaggatgagaagcggcgtcaccagcgtcgccgcagtaagcgcagcagccgc
agccgcagccgcagccgcagccggtcgcctcgccaccgccgccatcaccgcggctcaaag
gaacgcgcagagccagaccctcaggagcttgctcgcaagcgtggcaagacaaagacagag
cccaacccaatcatgactcgcgcaggtggcgcgtacatcccgcccgcccgcctgcgcgca
atgcagcagaacatcacagacaagagctccaaggagtatcaacgcctcgcgtggcagacg
ctgcgaaagcagatcaatgggttcatcaacaaagtgaacgtgtcgaacattcagtcgatt
gtcgttgatctctttggcgccaatctcgtccgcggtcgcggcctctttgctcgatcctgc
atgaaggcgcaagcctcgtcgcccacgttcacgcacgtgtacgcggggctcgttgctgtc
gtgaacacgaagctgccgtctgtcgggaaacttatcctgtcgcgtctggtgctgcagttt
cgcaagcgctaccgtctcaacgacaagctcacctgcctcaacacagcacgcttcattgca
cacctcatcaaccagcaggttgcgcacgagattcttgcgcttgagatccttgcgctgctg
ctggagcacgccaccgacgacagcatcgaggttgctgttgcgtttctgaaggaggttggg
cagtacctgaacgacgttgccccgcgcgggctcaactccacctttgatgctcttcgcgac
gtcctccaccaggggcagatttcgaagcgcacgcagtacatgatcgaggtgatgtttgct
gtgcggaaggacggcttcaaggaccacccgattgtgccggagggccttgatctggtggaa
gagtcggaccagatcacccacctcatctccctcgatgacgagattgatccccagtcaaag
attgacgtcttccagtacgacccacagtacgaggagaacgagagcaaatacgccgcaatc
aagcgggagattcttggggatgagagctctggggagagcagcagtggtgatgagtcatca
agcgacgaggacgaggatgaggaggaagaagcagcgcagacggcagccggtggtgagggc
ggacaggcgattatggacatgacgggcacggatctcgttgccttccgccgcacggtgtac
ctgaccatcatgtcgtccatcaactacgaggaggctgcacacaagctcatgaagctcaac
ctgcccccgggccacgagtctgagctgtgcaacatggtgattgagtgctgcagccaggag
cggtcatacctgaagatgtacggcctcctcgctgagcgcctctgcttgcttcgccgcgaa
taccaggatgcatacgtcgccgctttcgccgaccagtatgtgacgatccaccgactggag
acgaagccgctgcggcagattgccaagctgtttgcgcacctgctgtacatggacgccatt
ccctggacggcgctggaggtgatccacctcaacgaacgcgagacaacctcgtccagtcgc
atcttcatcaaggagctcttcctcgaggtgtcatcggcaatgggcctggagacgctcatt
gcccgcctgcgcgaccccacgctgcagcgctcgctcgcgggcctgttcccgctggacagc
ccgaaggacacgcggttctcgatcaactttttcacgacaattggtctcggagcgctgacg
gatgacatgcgcgaggcgctgaagaacgccccaaagcggctgatgcaggccaagacggag
gatgtgtcatcggatgagagcagcagtggcagcagcagcagcagtggctcttcttcatcc
tcatcgtcgtcatcatcgtctggttctgattctgattccgactccgggtcgtcctcctcc
tcctcgtcctcatcatcgagtggcagcgacagcgatgatgaccgtgaccgtcgtcgcgac
cgtggtcgtgagaggagcgtgcgtcgcagcagtcctccccgctccccgccaccgcgtgac
cgccgcatctccgctggctcccgcgcctccaacccgcctcgctcgtccccgccacgcgac
gccaaggcccccgccccacgcgacgccagccctccacgccaccatgacacacgtgccagc
cgtgatgagcgtgatgagcgtgatcgcgatcacgacacacgtgccagtcgtggggatgat
gcagcacgcgaggagcgacgggtgcgccgcaccccaccgcgctcccctgctgaccgccgc
cgccgcccccaatacagacgcccatctcgttcccgctcccgttcccgttcccactctcgt
gctcgctctcgtccccgctcgcgttcgcgttcgcgttcgccacgccgccgccgccggtcg
ccgcgcgcatcgcggacgagtcgcagcagccgcaggtcccggtccccactagcccgccgc
gaccgtgaccgcgatcgtgatcgtgatcgtgatcgtcgtcgttcgcgctcgcgctcccca
cgataccgacgccacacccgccgcccggatagcgacgatgagaacgaccgcaagcgcgcc
aagtag

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