Salpingoeca rosetta: PTSG_05894
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Entry
PTSG_05894 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
sre
Salpingoeca rosetta
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sre03041
]
PTSG_05894
Spliceosome [BR:
sre03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PTSG_05894
Complex C
U4/U6.U5 tri-SnRNP related factors
PTSG_05894
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MA3
MIF4G
FAM199X
Motif
Other DBs
NCBI-GeneID:
16073358
NCBI-ProteinID:
XP_004992787
UniProt:
F2UD35
LinkDB
All DBs
Position
Unknown
AA seq
981 aa
AA seq
DB search
MSGDESSSSSNSSGDEGKRTRRRVSEDRPPKDVKPAEATATTTGAEGEDSTSRDAKPASE
APAEASAPAAAKSPTPERARRRRHTKKERGRRSGSSGSSGSSSSSSSSGSSSSSSDSDSD
GGKKDEKRRHQRRRSKRSSRSRSRSRSRSPRHRRHHRGSKERAEPDPQELARKRGKTKTE
PNPIMTRAGGAYIPPARLRAMQQNITDKSSKEYQRLAWQTLRKQINGFINKVNVSNIQSI
VVDLFGANLVRGRGLFARSCMKAQASSPTFTHVYAGLVAVVNTKLPSVGKLILSRLVLQF
RKRYRLNDKLTCLNTARFIAHLINQQVAHEILALEILALLLEHATDDSIEVAVAFLKEVG
QYLNDVAPRGLNSTFDALRDVLHQGQISKRTQYMIEVMFAVRKDGFKDHPIVPEGLDLVE
ESDQITHLISLDDEIDPQSKIDVFQYDPQYEENESKYAAIKREILGDESSGESSSGDESS
SDEDEDEEEEAAQTAAGGEGGQAIMDMTGTDLVAFRRTVYLTIMSSINYEEAAHKLMKLN
LPPGHESELCNMVIECCSQERSYLKMYGLLAERLCLLRREYQDAYVAAFADQYVTIHRLE
TKPLRQIAKLFAHLLYMDAIPWTALEVIHLNERETTSSSRIFIKELFLEVSSAMGLETLI
ARLRDPTLQRSLAGLFPLDSPKDTRFSINFFTTIGLGALTDDMREALKNAPKRLMQAKTE
DVSSDESSSGSSSSSGSSSSSSSSSSSGSDSDSDSGSSSSSSSSSSSGSDSDDDRDRRRD
RGRERSVRRSSPPRSPPPRDRRISAGSRASNPPRSSPPRDAKAPAPRDASPPRHHDTRAS
RDERDERDRDHDTRASRGDDAAREERRVRRTPPRSPADRRRRPQYRRPSRSRSRSRSHSR
ARSRPRSRSRSRSPRRRRRSPRASRTSRSSRRSRSPLARRDRDRDRDRDRDRRRSRSRSP
RYRRHTRRPDSDDENDRKRAK
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcgacgaaagcagcagcagcagcaacagcagtggcgatgagggcaagcgcacc
agacgccgtgtcagtgaagatcgtccaccaaaggacgtgaaaccagcagaggccacagcc
accacgactggtgccgagggtgaggattccacttcccgcgatgcaaagccagcatcagag
gcgcccgcagaggcatcggctcctgcagccgccaagtcgccaacaccggagcgtgcacgc
cgtcgccgacacacaaagaaggagcgcggtcgcaggtccggcagctctggctcaagcggc
agcagcagcagcagcagcagcagtggtagcagcagctcctcgagcgacagtgacagcgat
ggcggaaagaaggatgagaagcggcgtcaccagcgtcgccgcagtaagcgcagcagccgc
agccgcagccgcagccgcagccggtcgcctcgccaccgccgccatcaccgcggctcaaag
gaacgcgcagagccagaccctcaggagcttgctcgcaagcgtggcaagacaaagacagag
cccaacccaatcatgactcgcgcaggtggcgcgtacatcccgcccgcccgcctgcgcgca
atgcagcagaacatcacagacaagagctccaaggagtatcaacgcctcgcgtggcagacg
ctgcgaaagcagatcaatgggttcatcaacaaagtgaacgtgtcgaacattcagtcgatt
gtcgttgatctctttggcgccaatctcgtccgcggtcgcggcctctttgctcgatcctgc
atgaaggcgcaagcctcgtcgcccacgttcacgcacgtgtacgcggggctcgttgctgtc
gtgaacacgaagctgccgtctgtcgggaaacttatcctgtcgcgtctggtgctgcagttt
cgcaagcgctaccgtctcaacgacaagctcacctgcctcaacacagcacgcttcattgca
cacctcatcaaccagcaggttgcgcacgagattcttgcgcttgagatccttgcgctgctg
ctggagcacgccaccgacgacagcatcgaggttgctgttgcgtttctgaaggaggttggg
cagtacctgaacgacgttgccccgcgcgggctcaactccacctttgatgctcttcgcgac
gtcctccaccaggggcagatttcgaagcgcacgcagtacatgatcgaggtgatgtttgct
gtgcggaaggacggcttcaaggaccacccgattgtgccggagggccttgatctggtggaa
gagtcggaccagatcacccacctcatctccctcgatgacgagattgatccccagtcaaag
attgacgtcttccagtacgacccacagtacgaggagaacgagagcaaatacgccgcaatc
aagcgggagattcttggggatgagagctctggggagagcagcagtggtgatgagtcatca
agcgacgaggacgaggatgaggaggaagaagcagcgcagacggcagccggtggtgagggc
ggacaggcgattatggacatgacgggcacggatctcgttgccttccgccgcacggtgtac
ctgaccatcatgtcgtccatcaactacgaggaggctgcacacaagctcatgaagctcaac
ctgcccccgggccacgagtctgagctgtgcaacatggtgattgagtgctgcagccaggag
cggtcatacctgaagatgtacggcctcctcgctgagcgcctctgcttgcttcgccgcgaa
taccaggatgcatacgtcgccgctttcgccgaccagtatgtgacgatccaccgactggag
acgaagccgctgcggcagattgccaagctgtttgcgcacctgctgtacatggacgccatt
ccctggacggcgctggaggtgatccacctcaacgaacgcgagacaacctcgtccagtcgc
atcttcatcaaggagctcttcctcgaggtgtcatcggcaatgggcctggagacgctcatt
gcccgcctgcgcgaccccacgctgcagcgctcgctcgcgggcctgttcccgctggacagc
ccgaaggacacgcggttctcgatcaactttttcacgacaattggtctcggagcgctgacg
gatgacatgcgcgaggcgctgaagaacgccccaaagcggctgatgcaggccaagacggag
gatgtgtcatcggatgagagcagcagtggcagcagcagcagcagtggctcttcttcatcc
tcatcgtcgtcatcatcgtctggttctgattctgattccgactccgggtcgtcctcctcc
tcctcgtcctcatcatcgagtggcagcgacagcgatgatgaccgtgaccgtcgtcgcgac
cgtggtcgtgagaggagcgtgcgtcgcagcagtcctccccgctccccgccaccgcgtgac
cgccgcatctccgctggctcccgcgcctccaacccgcctcgctcgtccccgccacgcgac
gccaaggcccccgccccacgcgacgccagccctccacgccaccatgacacacgtgccagc
cgtgatgagcgtgatgagcgtgatcgcgatcacgacacacgtgccagtcgtggggatgat
gcagcacgcgaggagcgacgggtgcgccgcaccccaccgcgctcccctgctgaccgccgc
cgccgcccccaatacagacgcccatctcgttcccgctcccgttcccgttcccactctcgt
gctcgctctcgtccccgctcgcgttcgcgttcgcgttcgccacgccgccgccgccggtcg
ccgcgcgcatcgcggacgagtcgcagcagccgcaggtcccggtccccactagcccgccgc
gaccgtgaccgcgatcgtgatcgtgatcgtgatcgtcgtcgttcgcgctcgcgctcccca
cgataccgacgccacacccgccgcccggatagcgacgatgagaacgaccgcaagcgcgcc
aagtag
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