Salpingoeca rosetta: PTSG_09236 Help Entry PTSG_09236        CDS       T04136                                  Name (RefSeq) uncharacterized protein   KO K12879   THO complex subunit 2 Organism sre  Salpingoeca rosetta Pathway sre03013   Nucleocytoplasmic transport sre03040   Spliceosome Brite KEGG Orthology (KO) [BR:sre00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     PTSG_09236   09122 Translation    03013 Nucleocytoplasmic transport     PTSG_09236  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sre03019]     PTSG_09236    03041 Spliceosome [BR:sre03041]     PTSG_09236 Messenger RNA biogenesis [BR:sre03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      PTSG_09236 Spliceosome [BR:sre03041]  Complex C   Other components    EJC/TREX     PTSG_09236  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     PTSG_09236 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 TPR_19 Motif Other DBs NCBI-GeneID:  16070042 NCBI-ProteinID:  XP_004989493 UniProt:  F2UN45 LinkDB All DBs Position Unknown AA seq 1394 aa AA seqDB search MSSPLAESTTALVAALQDSESFSVGAVEVLRDVFAGFATGDVSADDITAFLQQDVIKENE GFDVIAADSLMLAVAENKANETKMHELVKAVFASGAIDQSILRERLDIAVLKACKLVPAD YDKGLMRMRMKMFYKQEKYNLFHEENEGFAKVVTELGQDFTAASVTADDLITRIRTLVGF FNLDPNRVLDLMLDALEEHPQHAAVYTACLAQFTTAQDSIANLIGLKLAAIAKQPGPPPT SLYATIAHLMDSGLLSLSALEPHLLPTLEETRERVRAYVKSVTKYVNTSAMSQEVQAQLD AAAAAADVDELKAKQRDQRLGLAVAFLKNGNWDLAEKIMSQLPAFYVPSLPAARTAMLTT LHHCIEPLYRSVAATKLSRPCPAATASSSSSSSSSSSMPACTSLVDFAARVMPALSSLGP FLADDPVLMTKAVRVCAHLVSLAKEAGEKSTAMLAEVEDLFARCILPSLMRCSSNAPIAA DVWAALQQLPYQARFKIYGYWKNESWKNQPELLLVRAKTFKKAKSLFQRLTAENAGKKMA HDLSKVAFTNPVHLFEYALRQIEAYSNLVEPLSDALKTHTHLAYDILSFCVLEALSNPQK SRMKKEDLFESSWLQNLAAFVGLILRKYPVDFEPILQFIINRLKENQVLDLIVLREIITK IAGYENAEDMTDMQLQAMAGGQILRQRGSTFSNARLTKDQRRALKHMTETFTSAQDEILI PLIILIAQQRVELVFGGDKERPVVLIGELYDKCQEVLMQLMQCVEANISESLYFKRLPPL EELCTTYHLEVDTAMFLHRRRLTASIEDLAADKSQTGTAVQKYMRASETAMKDVTSFLKS LHPPAVWTELSPQLYSTFWTLSLYDLETPSAAYAHVIAELEEANRQNRPAPGDTSRTEKR KRREITSNEATIKALKEEESRQKAVVKCAHEMLTSLSKSFVQPSHSLKSVVVSEFLRLCI YPRCFFSAADAVYCAKFAVLLHSMRTENWSTLLYFNFVFKHTACIIMSATENEASRYGRF LNETMRVLARFHADPSVYQKECAPTPGFIASFNKNEPQTVKFADYRKMCYNWQTRLLKDF LSMLNSKDPSLIRRAVLVMIKVVDHFPRMKNLAKVLLEAIEQILKDETTRQDVKLLVTSY NRQLLDRSGTWVPANVYNPTDTKSAAKKAPASSGKAAASPAKKAKATTDKSSTSSSSSKT DGKKIATKSNSSSSTPAKTTSSSSNSKRTPKSEHKSSSSSSSRKSSGSSGKKSESNKTPK DEKRRSSKDDKSTAATTPTTTTTSSSSSSKRRSSTDPKSGKDHGRAAPSPSSSSSSSRAR APPPLPSRGGSTEDLQPKRAKVSSSSSSSRDRSGSPPPPPTERESRRSRDRRGDTRSAAR DTRLPPPPSRRSRR NT seq 4185 nt NT seq  +upstreamnt  +downstreamnt atgagcagtccactggctgaaagcacgacagccttggtggctgcgctgcaagacagcgaa tccttcagtgttggggctgtcgaagttctgcgcgatgtgtttgccggatttgccactggc gacgtctccgccgatgacatcaccgccttcctccaacaggacgtgatcaaggagaatgag ggctttgatgtgattgcggcagactccctcatgcttgctgttgccgagaacaaagccaac gaaaccaagatgcacgagcttgtcaaggccgtgtttgcatctggcgccatcgaccagagc atcctgcgcgaacgcctcgacattgccgttctcaaggcctgcaaacttgttcccgccgac tacgacaaggggctgatgcgcatgcgcatgaagatgttctacaagcaggagaagtacaac ctgttccacgaggagaacgaagggtttgccaaggtggtgacggagcttggccaggacttc acagcggccagcgtcaccgctgacgatctcatcacccgcatccgcaccctcgtcggcttc ttcaaccttgatcccaaccgtgtgcttgacctgatgctggatgcgcttgaagagcacccg caacacgccgccgtctacaccgcctgcctggcgcagttcacgacagcacaagactccatc gccaacctcatcggcctcaagctcgctgcaatcgcaaagcagcccggcccgccgccaacg tcgctgtatgcgaccatcgcccacctcatggacagcggtctcctctccctctccgccctt gagccgcacctcctgccaacgcttgaggagacacgcgagcgcgtgcgcgcatatgtcaag tccgtcaccaaatacgtcaacacctctgccatgtcgcaggaggtgcaggctcagcttgat gctgctgccgctgctgcggatgtggacgagctgaaggcgaagcagcgcgatcagcggctt ggtctcgccgttgcgttcctcaaaaacggaaactgggacctggcagagaagataatgtca cagctgcctgcgttctacgtgccgtcgctgcctgctgcgcgcacggcgatgctgaccacg ctgcaccactgcatcgagcccctctaccgctccgtcgccgcaaccaagctgtcccggccc tgccctgccgccacggcctcgtcatcatcgtcatcgtcatcgtcatcgtcgatgcctgca tgcacgtcgctggttgactttgcggcgcgcgtcatgcctgcactctcctcgctcgggcct tttcttgcagacgaccccgtcctcatgacaaaggctgtgcgcgtgtgtgcgcatcttgtg tcgctggcaaaagaggccggagaaaaaagcacggcaatgctggcggaggtggaggatctg tttgcccgatgcatcctcccctccctcatgcgttgctcaagcaacgcgccaattgctgcg gatgtgtgggctgcgctgcagcagctgccgtaccaggcccgcttcaagatctacggctac tggaagaatgaatcctggaagaaccagccggaattgctgcttgtgcgtgcgaagactttc aagaaggcaaagtcactgttccagcggttgacggcagagaatgctggcaagaagatggcg cacgatctgagcaaggttgcattcaccaaccccgtgcacctcttcgaatacgcgctcagg cagattgaggcgtacagcaacctcgttgagccgctgtctgatgcgctgaagacacacacg cacctcgcatacgacatcctctccttttgtgtcctcgaggcgctctcaaacccgcagaag agcaggatgaagaaggaggatctgtttgagagctcgtggctgcagaatttggccgcgttt gttggtctcatcctccgcaaataccccgtcgactttgaacccatcttgcagttcatcatc aaccggctgaaggagaatcaggtgctcgacctcattgttctccgcgaaatcatcacgaag attgccggatacgaaaacgccgaagacatgacggatatgcagctgcaggcgatggccggc gggcagattctgcgccagcgcggatcaacattctccaacgcacgcctgacgaaagaccag cgacgcgcgctcaagcacatgacggagacgttcacatctgcacaggacgaaatcctgatt ccgctcatcatcctcatcgcgcagcagcgtgtcgagctggtgtttggcggggacaaggag cgccctgttgttctgattggggagctgtacgacaagtgccaggaggtcctcatgcagctc atgcaatgcgtcgaggcgaacatctcagagtcgctttacttcaaacgcctgccgccgctg gaggagctgtgcacgacgtaccacctcgaggtcgacaccgccatgttcctgcacaggcgt cggctgacggcgtcgattgaggatttggcggcggataaatcgcagacgggaacagcggtg cagaagtacatgcgcgcatcggagacggcaatgaaggacgtcacatcgttcctcaagtcc ctccacccgccagcggtgtggacggagctgagcccgcagctgtactcaacattctggacg ctctcgctttatgatctggagacgccgtcggccgcatatgcgcacgtcattgcagagctc gaggaggcaaaccggcagaaccggcctgcccccggggacacgtcgcgaacggagaagagg aagcgccgtgaaatcaccagcaatgaagcaaccatcaaggccctcaaggaggaggagtcg cgccagaaagcggtcgtgaaatgcgcacacgagatgctgacctccctctccaagtcattc gtccagccgtcccactcgctgaagagcgtcgttgtgtcggagtttctgcgcctgtgcatc tacccgcgatgcttcttctcggctgcagatgccgtgtactgtgccaagtttgctgtgctg ctgcactcgatgcgcacggaaaactggagcaccctgctctactttaacttcgtcttcaag cacaccgcatgcatcatcatgagcgcgacggagaacgaggcgagccggtatgggcgcttc ctcaacgagaccatgcgtgtgcttgcccgcttccacgcagacccgtccgtctaccagaag gagtgcgctcccaccccagggttcattgcaagtttcaacaagaacgagccgcagacggtc aagttcgcagattaccgcaagatgtgctacaactggcagacacgcctcctcaaggatttc ctgtcgatgctgaacagcaaagacccgtcgctgattcgccgcgccgtcctcgtcatgatc aaggttgtcgaccacttcccgcggatgaagaacttggccaaggtgctgcttgaagccatt gagcagatactgaaggacgagacaacacgacaggatgtgaagctgctggtgacgtcgtac aaccgccaactcctcgacaggagcggcacctgggtccccgcgaacgtgtacaatccgacc gacaccaagtctgcagcgaagaaggcgccagcgtcgtccgggaaagcagctgcgtcccca gcgaagaaggcaaaggcaacaacagacaagtcatcaacatcatcatcgtcctcgaagaca gatgggaagaagattgctacaaagagcaacagcagcagcagcacgcctgccaagaccaca tcgtcctcatccaacagcaagcgaacgccaaagtctgagcacaagtcgtcatcatcatca tcgtcacgcaagagcagtggcagcagtggcaagaagagcgaaagcaacaaaacgcccaag gatgagaagcgcagatcaagcaaggacgacaagagcaccgctgccacaaccccgaccacc accaccaccagcagcagcagcagcagcaagcgtcggtcctcgacggatccaaagagcggc aaagaccacggccgcgccgccccatcaccatcgtcatcgtcgtcatcgtcacgtgcacgt gcaccgccgccacttccctcacgcggtggcagcacagaggacctgcagcccaagcgagca aaggtctcctcttcctcgtcctcttcccgcgaccggagtggctcccctccccctccgccg acggagcgcgagagccgtcggagccgtgatcggcgcggggacactcgctctgctgcccgc gacacgcgcctgccgcccccgccttcccgtcgcagcagacgctga

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