KEGG   Salpingoeca rosetta: PTSG_10487
Entry
PTSG_10487        CDS       T04136                                 
Name
(RefSeq) uncharacterized protein
  KO
K14295  nuclear pore complex protein Nup50
Organism
sre  Salpingoeca rosetta
Pathway
sre03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:sre00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PTSG_10487
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sre03019]
    PTSG_10487
Messenger RNA biogenesis [BR:sre03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PTSG_10487
SSDB
Motif
Pfam: NUP50 Ran_BP1 Radial_spoke
Other DBs
NCBI-GeneID: 16069409
NCBI-ProteinID: XP_004988867
UniProt: F2UPT4
LinkDB
Position
Unknown
AA seq 563 aa
MSAKRRPDKQITADDPDDDGDANEGGSGPFLRASKDVVSQRRIAQARRSSSSSTGSSSAS
KGAFAGFKGFGSAAVKGVSQFKGLSASPGSFGAAPSSSASSSSTGTPKTTPAFGGAASST
STSSSSSATSPFKFGGPAKPVTAAAAAAAAASSSGDDKDKGKEKDTAASSGPTFKFGAKT
GAITSSGSGSGGFSFGGAKAKPASAKSAFGQAAKVFGGGSKKTGGDDDDDNKKEDEEEDE
EEGSNAGDGDEDDEETGSDEDEDNTDTDTDEDDDGDNKRKKNKSGDDESPAPKFTFGKPT
GKLPGLSSIFGGSGGGSKLKPAQGAVFGKVGTFKPTTTTPPAPAATSAKATDGDGGSDLT
DEQKTKMQGLNDSLLSFLKEQTAASAGVLDFTPTLLSYVDQAKTILTAGKATMVTAPSSS
GAQKQQQQQSQQQPEEKEELEEGVLYKTRVKLRYQQKGEDGKIEWKEKGTGTLRLEDAED
GTKKRVIIRADGTTGLILLNVYLASQTPVNRTGKREVMTSMVPNPPLNPKKPEDKPVVFM
ISCKTPAFADELAAKMKEAKEAC
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgtctgccaagcgtcgcccagacaagcaaattactgcggatgaccctgacgatgacggg
gacgccaacgagggcggcagtggcccattccttcgcgcttccaaggacgtcgtctcacag
cgcaggattgcacaggcccgccgctcctcatcctcgtccactggctcatccagtgccagc
aagggtgcattcgcgggcttcaaaggcttcggctctgcagccgtgaagggcgtctcccag
ttcaaaggcctatcagcgagccccggcagctttggcgcagcgccatcgtcgtcggcatcg
tcgtcgtccaccggcacgcccaagaccacaccagcctttgggggcgctgcttcgtcgaca
tcgacatcctcctcctcttcggccacttcgccgttcaagtttggcgggccagccaagcca
gtaacagcagcagcagcagcagcagcagcagcgtcatcatcaggagacgacaaggacaag
ggcaaggagaaagacacggcggcaagcagtggaccaacgttcaagtttggcgcaaaaacg
ggcgctatcaccagcagcggcagcggcagtggggggttttcgtttggcggtgcaaaagcg
aagcctgcgagtgccaagtctgcgtttgggcaggccgcaaaggtgtttggtggcggcagc
aagaagacgggtggtgacgatgatgacgacaacaagaaggaggacgaggaagaggacgaa
gaggaaggcagcaacgctggtgatggtgatgaggatgatgaggagacagggagcgatgag
gatgaagacaacacggacacagacacggatgaggacgacgatggagacaacaagcggaag
aagaacaagtctggtgatgacgagtcgcctgcgcccaaattcacctttggcaagcccacg
gggaagctgcctggcctgtcctccatttttggtggcagcggcggcggcagcaagctcaag
cccgcacagggcgctgtctttggcaaggtgggcacgttcaagccaactacaaccacccca
ccagcaccagcagcgacatcagcaaaggcgacggatggcgatggtggcagtgatctgacg
gacgagcagaagacgaagatgcaaggcctcaatgactcgctcctctcctttctcaaggag
cagactgctgcaagtgctggggtgcttgactttacgccgacgctcctgagctatgtcgac
caggcaaagaccatcctcacagcaggcaaggcgacgatggtaacagcgccgtcgtcgtct
ggtgctcagaagcagcagcagcagcaatcacagcagcagccggaggagaaggaagagctg
gaggagggcgtcctctacaagacacgggtgaagctgcggtaccagcagaagggggaggat
gggaagattgagtggaaggaaaagggcacgggcacattgcggctggaggatgccgaggac
ggtaccaagaagcgcgtcatcattcgcgcagacggaacaacagggctgattctgctgaac
gtgtatctcgcatcccagacgccggtcaaccgaaccggcaaacgcgaggtgatgacgagc
atggtgccgaacccgcccctcaacccaaagaagccggaggacaagcccgtggtgtttatg
atcagctgcaagacgcctgcgtttgcggatgagctggccgccaagatgaaggaggcaaag
gaggcgtgctga

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