Salpingoeca rosetta: PTSG_10487
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Entry
PTSG_10487 CDS
T04136
Name
(RefSeq) uncharacterized protein
KO
K14295
nuclear pore complex protein Nup50
Organism
sre
Salpingoeca rosetta
Pathway
sre03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sre00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PTSG_10487
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sre03019
]
PTSG_10487
Messenger RNA biogenesis [BR:
sre03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PTSG_10487
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUP50
Ran_BP1
Radial_spoke
Motif
Other DBs
NCBI-GeneID:
16069409
NCBI-ProteinID:
XP_004988867
UniProt:
F2UPT4
LinkDB
All DBs
Position
Unknown
AA seq
563 aa
AA seq
DB search
MSAKRRPDKQITADDPDDDGDANEGGSGPFLRASKDVVSQRRIAQARRSSSSSTGSSSAS
KGAFAGFKGFGSAAVKGVSQFKGLSASPGSFGAAPSSSASSSSTGTPKTTPAFGGAASST
STSSSSSATSPFKFGGPAKPVTAAAAAAAAASSSGDDKDKGKEKDTAASSGPTFKFGAKT
GAITSSGSGSGGFSFGGAKAKPASAKSAFGQAAKVFGGGSKKTGGDDDDDNKKEDEEEDE
EEGSNAGDGDEDDEETGSDEDEDNTDTDTDEDDDGDNKRKKNKSGDDESPAPKFTFGKPT
GKLPGLSSIFGGSGGGSKLKPAQGAVFGKVGTFKPTTTTPPAPAATSAKATDGDGGSDLT
DEQKTKMQGLNDSLLSFLKEQTAASAGVLDFTPTLLSYVDQAKTILTAGKATMVTAPSSS
GAQKQQQQQSQQQPEEKEELEEGVLYKTRVKLRYQQKGEDGKIEWKEKGTGTLRLEDAED
GTKKRVIIRADGTTGLILLNVYLASQTPVNRTGKREVMTSMVPNPPLNPKKPEDKPVVFM
ISCKTPAFADELAAKMKEAKEAC
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccaagcgtcgcccagacaagcaaattactgcggatgaccctgacgatgacggg
gacgccaacgagggcggcagtggcccattccttcgcgcttccaaggacgtcgtctcacag
cgcaggattgcacaggcccgccgctcctcatcctcgtccactggctcatccagtgccagc
aagggtgcattcgcgggcttcaaaggcttcggctctgcagccgtgaagggcgtctcccag
ttcaaaggcctatcagcgagccccggcagctttggcgcagcgccatcgtcgtcggcatcg
tcgtcgtccaccggcacgcccaagaccacaccagcctttgggggcgctgcttcgtcgaca
tcgacatcctcctcctcttcggccacttcgccgttcaagtttggcgggccagccaagcca
gtaacagcagcagcagcagcagcagcagcagcgtcatcatcaggagacgacaaggacaag
ggcaaggagaaagacacggcggcaagcagtggaccaacgttcaagtttggcgcaaaaacg
ggcgctatcaccagcagcggcagcggcagtggggggttttcgtttggcggtgcaaaagcg
aagcctgcgagtgccaagtctgcgtttgggcaggccgcaaaggtgtttggtggcggcagc
aagaagacgggtggtgacgatgatgacgacaacaagaaggaggacgaggaagaggacgaa
gaggaaggcagcaacgctggtgatggtgatgaggatgatgaggagacagggagcgatgag
gatgaagacaacacggacacagacacggatgaggacgacgatggagacaacaagcggaag
aagaacaagtctggtgatgacgagtcgcctgcgcccaaattcacctttggcaagcccacg
gggaagctgcctggcctgtcctccatttttggtggcagcggcggcggcagcaagctcaag
cccgcacagggcgctgtctttggcaaggtgggcacgttcaagccaactacaaccacccca
ccagcaccagcagcgacatcagcaaaggcgacggatggcgatggtggcagtgatctgacg
gacgagcagaagacgaagatgcaaggcctcaatgactcgctcctctcctttctcaaggag
cagactgctgcaagtgctggggtgcttgactttacgccgacgctcctgagctatgtcgac
caggcaaagaccatcctcacagcaggcaaggcgacgatggtaacagcgccgtcgtcgtct
ggtgctcagaagcagcagcagcagcaatcacagcagcagccggaggagaaggaagagctg
gaggagggcgtcctctacaagacacgggtgaagctgcggtaccagcagaagggggaggat
gggaagattgagtggaaggaaaagggcacgggcacattgcggctggaggatgccgaggac
ggtaccaagaagcgcgtcatcattcgcgcagacggaacaacagggctgattctgctgaac
gtgtatctcgcatcccagacgccggtcaaccgaaccggcaaacgcgaggtgatgacgagc
atggtgccgaacccgcccctcaacccaaagaagccggaggacaagcccgtggtgtttatg
atcagctgcaagacgcctgcgtttgcggatgagctggccgccaagatgaaggaggcaaag
gaggcgtgctga
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