Sphingomonas rhizophila: H9L12_04490
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Entry
H9L12_04490 CDS
T07014
Name
(GenBank) PAS-domain containing protein
Organism
srhi
Sphingomonas rhizophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS_7
HisKA
PAS_4
HATPase_c_2
TPR_9
DUF6247
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
QNN65811
UniProt:
A0A7G9SD86
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All DBs
Position
917254..919611
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AA seq
785 aa
AA seq
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MTMGPNLASAIIVIAALWVAIAAFLSVLAVRRIRQAQGLISAAQDFRSLLEAAPARPLVV
FPDGKIEADRQLLRDIGLEETPKRFVELARGDHGLVAEDVAALETEITNASLGGKAFRRQ
VRVAGSSRAIEVRGGPAASSAVPGTMLLWLSDVSGAEAERATLARRLDQTEGALDALTHL
IEAAPFPMWYRGPDLSLGLVNSAFVSAVQARDAAEVIAEGSELIEPRAEEDAQAGAARAL
ATGRPYSRTLPATIGDKRRMLRLVDVPLPTGAVAGFAIDIQDLEDARIELARTIESQREL
ADRMTAGTVQFDADRNLDFFNQPFAIMARLEPEWLAERPEFDRVLERMRESHRLPEVRDF
PAWKAERRDWFISADEMIEEDWILANGDHLRVVAQPMPDGGLRLILEDRTEQVRLASARD
TLLRVRAATFDNLFEVISVFASDGRLYLWNRRFSEVWNLDETWLGEHPRVDELVPALAKQ
LVNPTAAAQVREMVRATTSNRTSGNGRVTMNDGRQFEFAAVPLPDGNALFTMIDITDSSR
IESALRERATALEEADRVKTGFVANMSYELRTPLTSIGGFAEMLQAGYAGKLAPAAADYV
DAILESVARLSKMIDDVLDLTQGDTRGVVLEKERVDMAGLCRATGEAIRPRAIEKSMKFD
VEVAPSTGYVVGDARRLRESVEHLLRNAIAYTDAGGRVALRVSGSDDEVMVSVADNGPGI
APEDHAQVFDRFHRVGGAGRGGDAALGLGLPLTRQFVEAHGGRVELMSALGKGTTVSFTI
PRGPA
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatggggccgaacctcgcttccgccattatcgtgatcgccgccctgtgggtggct
atcgccgcgttcctgtcggtcctcgccgtccgacggatacggcaggcgcagggcctgatc
tccgccgcacaggacttccggtcgctgctggaagcagcgcctgcgcgaccgctcgtcgtt
ttcccggatggcaagatcgaggctgaccgccagttgctcagggacattggcctggaagaa
acgcctaaacgcttcgtcgaactcgctcgcggcgatcatggcctcgtcgccgaagacgtc
gcggcgctcgagactgaaatcaccaatgcatcgcttggcggcaaagccttccggcgtcag
gtgcgggtcgccggatcaagccgtgcgatcgaggttcgtggcggccccgctgcctcgtcc
gcggtgccgggaacgatgctgttgtggctgtcggatgtgtccggggcggaggcggagcgc
gcgacgctggcgcgccggctggaccagacggagggcgcgctggatgcccttacgcacctg
atcgaggccgcaccatttccgatgtggtatcgcggtcccgacctgagcctgggcctggtc
aattcggcgttcgtgtccgcagtgcaggcgcgtgacgcggcggaggtcattgccgaaggc
agcgagctcatcgaaccgcgcgcggaggaggatgcgcaggccggggcggcgcgagcgctg
gcgacgggtcggccgtattcgcggaccctgccggcgacgatcggcgacaagcggcggatg
cttcggctggtcgacgtgcccttgccgaccggagccgtggccggtttcgcgatcgatatc
caagacctggaggatgcccggatcgagctcgcccggacgatcgaatcccagcgcgaactg
gcggaccggatgacggcgggcacggtccagttcgatgcggaccggaatctcgacttcttc
aaccagccgttcgccatcatggcgcggctggagcccgagtggctcgccgagcgccccgaa
ttcgaccgtgtcctggaacggatgcgggaaagtcaccgcctgccggaggtgcgcgacttc
ccggcgtggaaggccgagcggcgggactggttcatcagcgccgacgagatgatcgaagag
gactggatcctcgcgaacggtgatcaccttcgagtggtggcgcagccgatgcccgacggc
ggcctgcggctgatccttgaggacaggacggagcaggttcgactggcgtcggcgcgcgat
accctgcttcgtgtgcgcgcggcgaccttcgacaatctgttcgaagtgattagcgtcttc
gcatccgacgggcggctgtatttgtggaatcgccgcttttccgaggtctggaacctcgac
gagacctggcttggcgagcatccgcgcgtcgacgagctggttccggcgcttgccaagcaa
ctcgtcaaccccactgcagcggcgcaagttcgcgagatggtgcgtgcaacgaccagcaac
cgcacgtcgggaaatggccgggtgacgatgaacgatggtcgccagttcgagtttgcggca
gtgccgctgcccgatggcaatgcccttttcacgatgatcgacatcaccgattcgtcgcgc
atcgaatcggcccttcgcgaacgggccacggcgctggaagaggcggatcgggtgaagacc
ggtttcgtcgcgaacatgagctacgaactgcgcacaccactaacctcgatcggcggtttc
gcggagatgctgcaggcgggttatgccgggaagctggcgcccgccgccgccgactatgtc
gacgccatcctcgaatccgtggcgcgtttgtcgaagatgatcgatgatgttcttgacctg
acacaaggcgatacgcgcggcgtggtcctggaaaaggaacgggtcgacatggctggcctg
tgccgcgccaccggcgaagcgatccggccgcgggcgatcgaaaaatcgatgaaattcgat
gtcgaggtcgccccgtcgacaggctacgtcgtcggcgatgcgcggcgattgcgtgaatcc
gtcgaacatctgctccgcaatgcgatcgcctacaccgatgccggcggccgggtggcgctg
cgcgtgtcaggcagcgacgatgaagtgatggtcagcgttgccgacaacggtccggggatc
gcgcccgaagaccatgcccaggtgtttgaccgcttccatcgcgtcggcggcgccggtcgt
ggcggcgatgcggcgctgggccttggccttccgctcacccgccagtttgtcgaggcgcac
ggcggtcgcgtcgagctcatgtccgcattgggcaaggggacgacggtcagcttcacgatc
ccccgagggcccgcttga
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