Spirosoma rhododendri: HH216_07900
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Entry
HH216_07900 CDS
T08048
Name
(GenBank) OmpA family protein
Organism
srho
Spirosoma rhododendri
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CarboxypepD_reg
OmpA
PD40
CarbopepD_reg_2
SdrD_B
TPR_14
TPR_7
TPR_12
bMG3
TPR_19
SpaA
TPR_16
TPR_4
TPR_8
TPR_10
DUF1416
Big_1
Uma2
TPR_5
TPR-S
Motif
Other DBs
NCBI-ProteinID:
QJD78355
UniProt:
A0A7L5DJR8
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Position
1909025..1911478
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AA seq
817 aa
AA seq
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MTSTKLYKWSVVLLLLLSGMPVLAQTDSLLLQADRMLAWKAYGRAIDTYTQLLNATPNQL
TPVQKIRAQTQLAQAYRQTGDGSKAERIYRQLIDGGKNTDARQMLYYAQTLAGNGKFQEA
QRQYEQYLRVRDSVATRQKGARPSGIAGNVDGRRGSVAYRVEYLALDSPGEEFSPAFFQN
GLVYVAGTQGGTTVKGKGGGAGFLDLLYVPDRNNLPATTVIGSNGQETPVTSKRVRSERV
LGDDAYTRPTANDSRTVPGFEGGITIANGLGYEGRPVNEARRFDKSINSRYQEGPATFSA
DGSRIIFTRNDEVVRRGPKDSTAVTRLKLYTARQQNGAWVDVEEMPFNSDRYSVGHPTLS
RDGQRLYFVSDMPGGFGGTDLYVARSAGGRWGQPENLGETINSAGNELFPFVDEAGNLYF
ASDGRQGLGGLDIFFAVLSNEGAGRTIEHLDAPINSDKDDFGLITDAMRTGGYFSSNRRD
GNDDILRFTRQSSLYDCRDLTVRVYDTETDTSIDGVTVLVRSKSEGRTDQTLRTDSTGTI
RLCLDRSADFMFEVSRDGYVSNTVGFNTRYLTDDQPSRLEIGLTKPIPMIDTISTRSVNV
TNSVVLTVNRVRGVVLSEKDRRPISGVRVQLRNECNKGVREVVTAANGQYSFDLVPGCDY
TLTASKPTFGTNTRKIKRLPKKEKPRELSTDLKMLSVGDVITMDNIYYEPDRFALNPSAS
RELDRLVATMQQYPSLIIEIRSHTDSRGDAGTNKILSTQRANSVANYLNAHGISRSRILA
RGMGESAPVNNCVDGVICTEAEHQRNRRTEFRVVEIK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaacaaaattgtataagtggagtgtagtgctgctgttgctgcttagcggtatg
ccggtgcttgcccaaacagattcgctgttgctacaggccgaccggatgctggcctggaaa
gcatacggacgtgctatagatacgtacacgcaactgctcaacgctacacctaaccaactg
acgcctgtgcagaaaatacgggcgcagacgcagctggcgcaggcgtaccggcagacaggc
gatggaagtaaagccgagcggatataccgtcagctaatcgacggtggtaaaaataccgac
gcccggcagatgttgtactacgcgcagacccttgccgggaatggtaagtttcaggaggca
caacggcagtatgagcagtatctgcgggtgcgtgacagcgtggctacccggcaaaaaggg
gcgcggccatcgggtatagcggggaacgtcgacggccgtcgggggagtgtcgcataccgg
gtcgagtacctcgcgctcgacagccccggtgaagaatttagcccggctttttttcagaac
ggtctggtgtacgtggccggtacgcagggtggtacaacagtgaaaggcaagggaggggga
gctggatttttggatctcctctatgtgcccgaccgaaataacctgcctgctacaacagta
atcggcagtaacgggcaggaaacacccgttaccagtaagcgagtgcggtcagaacgagtg
cttggtgacgacgcttacacccggccgacggctaatgattcgcggacggtacccggtttt
gaaggaggtatcaccattgcgaacgggctgggttacgaagggcgtcccgtcaacgaagcg
cgacggttcgacaaatcgatcaatagccgataccaggaagggcccgcaacgtttagcgcc
gatgggtcgcgcattattttcacccggaatgatgaggttgtccgccgtgggccgaaagat
agcactgccgtaacccggctgaaactgtacactgcccggcagcaaaacggcgcgtgggtc
gacgtggaagagatgccattcaacagcgatcgttattctgtggggcaccccacacttagc
cgggacggacagcggctctacttcgtatcggatatgccgggcggctttggtggtacggat
ctgtacgtggcccggtccgccggtgggcgctgggggcagccggagaacctcggcgaaacg
ataaacagcgccggaaacgaattatttccgttcgtcgacgaggccgggaacctgtacttc
gcgtcggatgggcggcaggggctgggcgggctggatattttctttgccgtgctttctaat
gagggtgcggggcggacgatcgaacaccttgacgcgcctatcaattcggacaaggacgat
tttgggctcattaccgacgcgatgcgcacgggcgggtacttcagctcgaaccgtcgtgat
gggaacgacgatattcttcggtttacccggcaaagctcgctttacgattgccgcgacctg
accgtacgcgtgtacgataccgaaaccgacacatcgatcgacggcgtgacggtgctggta
cggtcgaagagcgaggggcgtaccgatcagacgctccgcaccgacagtactggtacaatc
cggctttgcctggatcgtagcgccgattttatgtttgaggttagccgcgacgggtacgtc
agtaacacggtaggcttcaacacccgttacctgaccgacgatcagccatcgcggctggaa
atcgggctgactaagcccattcctatgatcgacacgatcagtacgcgctcggtcaacgta
actaactcggtcgtgctgacggtcaaccgggtgcggggcgttgtgttgagtgagaaagat
cgtcgtcccatcagtggtgttcgtgtgcagctacgcaacgaatgcaacaagggcgtacgg
gaggtagttactgctgccaatggccaatactcgtttgacctggtaccgggctgtgattac
acgctgacggcttccaagcccacgtttggcaccaatacccgtaagattaaacggctgccg
aagaaagaaaagccgcgtgagctatcgaccgatctgaaaatgctgagtgtgggcgacgtc
atcacgatggataacatttattacgagcctgaccgatttgcgctcaatcccagcgcaagc
cgcgaactcgaccggctggtggcaaccatgcagcagtacccgtcgctgattatcgaaatc
agatcgcataccgatagccggggcgacgctgggactaacaaaattctgtcgacgcagcgg
gctaactcggtcgccaattacctcaacgcacacggaatcagccgctcccggattctggcg
cggggtatgggcgaatcggctccggtcaataactgcgtcgatggggtaatctgtacggaa
gctgaacaccagcgtaaccgccggaccgaattcagagtcgtggaaatcaagtaa
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