KEGG   Streptomyces rochei: SRO_2134
Entry
SRO_2134          CDS       T06265                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
srj  Streptomyces rochei
Brite
KEGG Orthology (KO) [BR:srj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:srj03016]
    SRO_2134
Enzymes [BR:srj01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     SRO_2134
Transfer RNA biogenesis [BR:srj03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    SRO_2134
 Prokaryotic type
    SRO_2134
SSDB
Motif
Pfam: TruB_N TruB_C TruB_C_2 PseudoU_synth_2 DKCLD TruB-C_2
Other DBs
NCBI-ProteinID: BBC93310
LinkDB
Position
complement(2435614..2436519)
AA seq 301 aa
MTQKHTTPDGLVIVDKPSGFTSHDVVAKMRGIARTRRVGHAGTLDPMATGVLVLGVERAT
KLLGHLALTEKEYLGTVRLGQNTLTDDAEGEITSSTDASKVTREAIDAGIAKLSGAIMQV
PSKVSAIKIDGVRSYKRAREGEEFEIPARPVTVSSFTVYDVRDAVAEDGTPVLDLVVSVV
CSSGTYIRALARDLGADLGVGGHLTALRRTRVGPYKLDSAKTLDQLQEELTVMPIAEAAE
AAFPRWGVDAKRARLLLNGVRLEMPDEYADAGPVAVFDPEGRFLALVELHKGKAKSLAVF
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacgcagaagcacaccacgcccgacggccttgtcatcgtcgacaagccgtcgggcttc
acttcgcacgacgtggtcgccaagatgcgcgggatcgcccggacccgccgcgtcggccac
gccggcaccctcgacccgatggcgaccggcgtgctggtcctcggtgtcgagcgcgccacc
aagctcctcggtcacctcgcgctgaccgagaaggagtacctgggcaccgtacggctgggc
cagaacaccctcaccgacgatgccgagggcgagatcacctcgtccaccgacgcctccaag
gtgacccgggaggccatcgacgccggtatcgccaagctgtccggcgccatcatgcaggtc
ccgtccaaggtcagcgccatcaagatcgacggcgtacggtcctacaagcgggcccgcgag
ggcgaggagttcgagatcccggcgcgcccggtgaccgtctcctccttcacggtgtacgac
gtccgcgacgccgtcgccgaggacggcaccccggtcctggacctggtcgtgtccgtcgtc
tgctcctccggcacctacatccgcgcgctcgcccgcgacctgggcgccgacctgggcgta
ggcgggcacctcaccgcgctgcgccgtacgcgcgtcgggccgtacaagctcgactcggcg
aagacgctggaccagctccaggaggagctgaccgtgatgccgatcgccgaggccgccgag
gccgccttcccgcgctggggggtggacgccaagcgcgccaggctgctgctgaacggggtc
cgcctggagatgcccgacgagtacgcggacgccggtcccgtcgccgtgttcgaccccgag
ggccgtttcctggcgctcgtcgaactgcacaagggcaaggccaagagcctggccgtcttc
gcctga

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